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Home › Dataset Library › Decreased Expression of Intelectin 1 in The Human Airway Epithelium of Smokers Compared to Nonsmokers

Dataset: Decreased Expression of Intelectin 1 in The Human Airway Epithelium of Smokers Compared to Nonsmokers

Lectins are proteins present on cell surfaces or as shed extracellular proteins that function in innate immune defense as phagocytic...

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Lectins are proteins present on cell surfaces or as shed extracellular proteins that function in innate immune defense as phagocytic receptors to recognize specific bacterial cell wall components. Based on the knowledge that cigarette smoking is associated with increased risk of bacterial infection, we hypothesized that cigarette smoking may modulate the expression of lectin genes in the airway epithelium. Affymetrix HG U133 Plus 2.0 microarrays were used to survey expression of lectin genes in large (3rd to 4th order bronchi) airway epithelium from 9 normal nonsmokers and 20 phenotypic normal smokers and small (10th to 12th order bronchi) airway epithelium from 13 normal nonsmokers and 20 phenotypic normal smokers. From the 72 lectin genes that were surveyed, there were no changes (>2-fold change, p<0.05) in gene expression in either large or small airway epithelium among normal smokers compared to nonsmokers except for a striking down regulation in both large and small airway epithelium of normal smokers of intelectin 1, a recently described lectin that participates in the innate immune response by recognizing and binding to galactofuranosyl residues in the cell walls of bacteria (large airway epithelium, p<0.003; small airway epithelium, p<0.002). TaqMan RT-PCR confirmed the observation that intelectin 1 was down-regulated in both large (p<0.05) and small airway epithelium (p<0.02) of normal smokers compared to normal nonsmokers. Immunohistochemistry assessment of biopsies of the large airway epithelium of normal nonsmokers demonstrated intelectin 1 was expressed in secretory cells, with qualitatively decreased expression in biopsies from normal smokers. Western analysis confirmed the decreased expression of intelectin 1 in airway epithelium of normal smokers compared to normal nonsmokers (p<0.02). Finally, compared to normal nonsmokers, intelectin 1 expression was decreased in small airway epithelium of smokers with early COPD (n= 13, p<0.001) and smokers with established COPD (n= 14, p<0.001), in a fashion similar to that of normal smokers. In the context that intelectin 1 is an epithelial molecule that likely plays a role in defense against bacteria, the down regulation of expression of intelectin 1 in response to cigarette smoking may contribute to the increase in susceptibility to infections observed in smokers, including those with COPD. Keywords: COPD Comparison of gene expression in airway epithelial cells of normal non-smokers, phenotypic normal smokers, smokers with early COPD, and smokers with COPD.

Species:
human

Samples:
87

Source:
E-GEOD-10006

PubMed:
18832735

Updated:
Dec.12, 2014

Registered:
Aug.12, 2014


Factors: (via ArrayExpress)
Sample AGE ETHNIC GROUP SMOKING STATUS SEX
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252808 not specified not specified smoker, 21 pack-years not specified
GSM252809 not specified not specified smoker, 25 pack-years not specified
GSM252810 not specified not specified smoker, 20 pack-years not specified
GSM2528 not specified not specified smoker, 30 pack-years not specified
GSM252812 not specified not specified smoker, 23 pack-years not specified
GSM252813 not specified not specified smoker, 24 pack-years not specified
GSM252814 not specified not specified smoker, 80 pack-years not specified
GSM252815 not specified not specified smoker, 60 pack-years not specified
GSM252816 not specified not specified smoker, 70 pack-years not specified
GSM252810 not specified not specified smoker, 20 pack-years not specified
GSM252818 not specified not specified smoker, 29 pack-years not specified
GSM252819 not specified not specified smoker, 45 pack-years not specified
GSM252820 not specified not specified smoker, 32 pack-years not specified
GSM252816 not specified not specified smoker, 70 pack-years not specified
GSM252822 not specified not specified smoker, 36 pack-years not specified
GSM252819 not specified not specified smoker, 45 pack-years not specified
GSM252824 not specified not specified smoker, 15 pack-years not specified
GSM252812 not specified not specified smoker, 23 pack-years not specified
GSM252826 not specified not specified smoker, 22 pack-years not specified
GSM252827 not specified not specified smoker, 33 pack-years not specified
GSM252828 47 white not specified M
GSM252829 not specified not specified COPD, GOLD-II, 33 pack-years not specified
GSM252830 50 white not specified M
GSM25283 55 white not specified M
GSM252832 not specified not specified COPD, GOLD-II, 20 pack-years not specified
GSM252833 59 white not specified M
GSM252834 not specified not specified COPD, GOLD-I, 35 pack-years not specified
GSM252835 51 black not specified M
GSM252836 46 black not specified M
GSM252837 56 white not specified M
GSM252838 60 asian not specified M
GSM252839 46 hispanic not specified M
GSM252840 not specified not specified COPD, GOLD-III, 53 pack-years not specified
GSM25284 52 hispanic not specified M
GSM252842 not specified not specified early-COPD, 23 pack-years not specified
GSM252843 not specified not specified early-COPD, 20 pack-years not specified
GSM252844 not specified not specified early-COPD, 12 pack-years not specified
GSM252845 not specified not specified early-COPD, 30 pack-years not specified
GSM252846 not specified not specified early-COPD, 42.5 pack-years not specified
GSM252847 not specified not specified early-COPD, 31 pack-years not specified
GSM252845 not specified not specified early-COPD, 30 pack-years not specified
GSM252849 not specified not specified early-COPD, 50 pack-years not specified
GSM252850 not specified not specified early-COPD, 90 pack-years not specified
GSM252843 not specified not specified early-COPD, 20 pack-years not specified
GSM252849 not specified not specified early-COPD, 50 pack-years not specified
GSM252853 not specified not specified early-COPD, 32 pack-years not specified
GSM252843 not specified not specified early-COPD, 20 pack-years not specified
GSM252855 41 black not specified M
GSM252856 61 white not specified M
GSM252857 37 black not specified F
GSM252799 not specified not specified non-smoker not specified
GSM252799 not specified not specified non-smoker not specified
GSM252860 47 black not specified M
GSM25286 36 white not specified M
GSM252799 not specified not specified non-smoker not specified
GSM252863 45 white not specified M
GSM252799 not specified not specified non-smoker not specified
GSM252865 49 white not specified F
GSM252799 not specified not specified non-smoker not specified
GSM252863 45 white not specified M
GSM252812 not specified not specified smoker, 23 pack-years not specified
GSM252819 not specified not specified smoker, 45 pack-years not specified
GSM252824 not specified not specified smoker, 15 pack-years not specified
GSM25287 40 black not specified M
GSM252872 48 white not specified M
GSM252873 not specified not specified smoker, 38 pack-years not specified
GSM252874 45 black not specified M
GSM252812 not specified not specified smoker, 23 pack-years not specified
GSM252874 45 black not specified M
GSM252814 not specified not specified smoker, 80 pack-years not specified
GSM252816 not specified not specified smoker, 70 pack-years not specified
GSM252855 41 black not specified M
GSM252860 47 black not specified M
GSM252855 41 black not specified M
GSM252882 48 black not specified M
GSM252816 not specified not specified smoker, 70 pack-years not specified
GSM252884 43 black not specified F
GSM252855 41 black not specified M

Tags

  • cell
  • copd

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