Dataset: Human exRNA Sequencing Study
Identify and analyze circulating extracellular RNA found in human serum. This is a dataset provided from Extracellular RNA Communication...
Identify and analyze circulating extracellular RNA found in human serum. This is a dataset provided from Extracellular RNA Communication consortium (ERCC). More details are available at http://exrna-atlas.org/exat/datasets.
- Species:
- human
- Samples:
- 5
- Updated:
- Apr.05, 2017
- Registered:
- Mar.23, 2017
Factors:
| Sample | Meets ERCC QC? | Biofluid Name | Anatomical Location | Biosample Metadata ID | Profiling Assay | Transcriptome Genome Ratio | Reference Genome Reads | Cell Culture Source | Transcriptome Reads | RNA Isolation Kit | exRNA Source | Condition |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IYB1 | YES | Bile | Entire bile duct | EXR-TPATE112KWEu-BS | smRNA-Seq | 0.862981 | 296,002 | Not Applicable | 255,444 | miRcury biofluids (Exiqon) | extracellular vesicle | liver disease |
| IYB2 | NO | Bile | Entire bile duct | EXR-TPATE1AS2Ypy-BS | smRNA-Seq | 0.449058 | 1,981,126 | Not Applicable | 889,640 | miRcury biofluids (Exiqon) | extracellular vesicle | liver disease |
| IYB3 | YES | Bile | Entire bile duct | EXR-TPATE1BNB4Cy-BS | smRNA-Seq | 0.869567 | 5,096,436 | Not Applicable | 4,431,695 | miRcury biofluids (Exiqon) | extracellular vesicle | liver disease |
| IYB4 | YES | Bile | Entire bile duct | EXR-TPATE180HxbC-BS | smRNA-Seq | 0.602402 | 322,416 | Not Applicable | 194,224 | miRNeasy (Qiagen) | extracellular vesicle | liver disease |
| IYB5 | YES | Bile | Entire bile duct | EXR-TPATE1RBdp9O-BS | smRNA-Seq | 0.644361 | 320,612 | Not Applicable | 206,590 | SeraMir Kit (System Biosciences) | extracellular vesicle | liver disease |