BioGPS
  • Home
  • Help
  • Plugins
  • Datasets
  • Sign Up
  • Login
Examples: Gene Symbol(s), Gene Ontology, Splicing plugins, Melanoma datasets
advanced
Home › Dataset Library › Oct2015_Urine_ExRNA

Dataset: Oct2015_Urine_ExRNA

To identify urinary RNA as non-invasive biomarkers for progression of chronic kidney disease. This is a dataset provided from...

Registered by ERCC
View Dataset

To identify urinary RNA as non-invasive biomarkers for progression of chronic kidney disease. This is a dataset provided from Extracellular RNA Communication consortium (ERCC). More details is available at http://exrna-atlas.org/exat/datasets.

Species:
human

Samples:
80

Updated:
Apr.05, 2017

Registered:
Apr.04, 2017


Factors:
Sample Meets ERCC QC? Biofluid Name Anatomical Location Biosample Metadata ID Profiling Assay Transcriptome Genome Ratio Reference Genome Reads Cell Culture Source Transcriptome Reads RNA Isolation Kit exRNA Source Condition
Neptune_Urine_33-10 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3310-BS smRNA-Seq 0.73913 23 Not Applicable 17 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-11 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3311-BS smRNA-Seq 0.142857 7 Not Applicable 1 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-12 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3312-BS smRNA-Seq 0.204545 44 Not Applicable 9 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-13 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3313-BS smRNA-Seq 0.912362 2,807 Not Applicable 2,561 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-14 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3314-BS smRNA-Seq 0.128289 304 Not Applicable 39 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-15 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3315-BS smRNA-Seq 0.436559 930 Not Applicable 406 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-17 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3317-BS smRNA-Seq 0.226471 340 Not Applicable 77 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-18 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3318-BS smRNA-Seq 0.846414 1,185 Not Applicable 1,003 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-19 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3319-BS smRNA-Seq 0.419355 31 Not Applicable 13 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-1 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP331-BS smRNA-Seq 0.482558 172 Not Applicable 83 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-20 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3320-BS smRNA-Seq 0.291262 103 Not Applicable 30 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-21 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3321-BS smRNA-Seq 0.490347 518 Not Applicable 254 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-22 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3322-BS smRNA-Seq 0.116279 86 Not Applicable 10 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-23 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3323-BS smRNA-Seq 1 9 Not Applicable 9 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-24 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3324-BS smRNA-Seq NA 10 Not Applicable NA Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-2 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP332-BS smRNA-Seq 0.319088 351 Not Applicable 112 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-3 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP333-BS smRNA-Seq 0.558003 681 Not Applicable 380 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-4 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP334-BS smRNA-Seq 0.266667 90 Not Applicable 24 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-5 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP335-BS smRNA-Seq 0.5 14 Not Applicable 7 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-6 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP336-BS smRNA-Seq 0.285714 35 Not Applicable 10 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-7 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP337-BS smRNA-Seq 0.68 25 Not Applicable 17 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-8 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP338-BS smRNA-Seq 0.514212 387 Not Applicable 199 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_33-9 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP339-BS smRNA-Seq 0.148217 20,018 Not Applicable 2,967 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-10 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3510-BS smRNA-Seq 0.292929 99 Not Applicable 29 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-11 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3511-BS smRNA-Seq 0.666667 36 Not Applicable 24 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-12 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3512-BS smRNA-Seq 0.230769 13 Not Applicable 3 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-13 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3513-BS smRNA-Seq 0.957385 1,713 Not Applicable 1,640 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-15 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3515-BS smRNA-Seq 0.686275 51 Not Applicable 35 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-16 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3516-BS smRNA-Seq 0.266187 1,807 Not Applicable 481 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-17 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3517-BS smRNA-Seq 0.702808 1,282 Not Applicable 901 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-18 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3518-BS smRNA-Seq 0.816583 1,194 Not Applicable 975 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-19 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3519-BS smRNA-Seq 0.135135 37 Not Applicable 5 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-1 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP351-BS smRNA-Seq 0.222222 261 Not Applicable 58 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-20 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3520-BS smRNA-Seq 0.196262 107 Not Applicable 21 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-21 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3521-BS smRNA-Seq 0.284539 608 Not Applicable 173 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-22 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3522-BS smRNA-Seq 0.124019 1,274 Not Applicable 158 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-23 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3523-BS smRNA-Seq 0.863139 548 Not Applicable 473 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-24 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3524-BS smRNA-Seq 0.464789 71 Not Applicable 33 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-2 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP352-BS smRNA-Seq 0.347639 466 Not Applicable 162 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-3 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP353-BS smRNA-Seq 0.388635 1,531 Not Applicable 595 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-4 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP354-BS smRNA-Seq 0.6 275 Not Applicable 165 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-5 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP355-BS smRNA-Seq 0.413953 215 Not Applicable 89 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-6 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP356-BS smRNA-Seq 0.171975 157 Not Applicable 27 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-7 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP357-BS smRNA-Seq 0.673307 251 Not Applicable 169 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-8 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP358-BS smRNA-Seq 0.560748 428 Not Applicable 240 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_35-9 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP359-BS smRNA-Seq 0.894113 9,869 Not Applicable 8,824 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-10 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3610-BS smRNA-Seq 0.326241 141 Not Applicable 46 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-11 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3611-BS smRNA-Seq 0.669291 127 Not Applicable 85 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-12 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3612-BS smRNA-Seq 0.265683 271 Not Applicable 72 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-14 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3614-BS smRNA-Seq 0.282493 754 Not Applicable 213 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-15 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3615-BS smRNA-Seq 0.0727273 5,390 Not Applicable 392 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-16 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3616-BS smRNA-Seq 0.142342 555 Not Applicable 79 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-17 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3617-BS smRNA-Seq 0.623221 1,335 Not Applicable 832 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-18 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3618-BS smRNA-Seq 0.895624 4,273 Not Applicable 3,827 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-19 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3619-BS smRNA-Seq 0.271084 332 Not Applicable 90 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-1 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP361-BS smRNA-Seq 0.505038 794 Not Applicable 401 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-20 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3620-BS smRNA-Seq 0.855166 2,023 Not Applicable 1,730 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-21 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3621-BS smRNA-Seq 0.541755 7,544 Not Applicable 4,087 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-22 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3622-BS smRNA-Seq 0.404157 433 Not Applicable 175 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-23 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3623-BS smRNA-Seq 0.934545 4,843 Not Applicable 4,526 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-24 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3624-BS smRNA-Seq 0.682039 412 Not Applicable 281 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-2 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP362-BS smRNA-Seq 0.232514 529 Not Applicable 123 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-3 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP363-BS smRNA-Seq 0.517611 653 Not Applicable 338 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-4 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP364-BS smRNA-Seq 0.417607 443 Not Applicable 185 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-5 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP365-BS smRNA-Seq 0.849057 53 Not Applicable 45 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-6 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP366-BS smRNA-Seq 0.0744849 631 Not Applicable 47 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-7 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP367-BS smRNA-Seq 0.358377 1,331 Not Applicable 477 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-8 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP368-BS smRNA-Seq 0.658637 1,453 Not Applicable 957 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_Urine_36-9 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP369-BS smRNA-Seq 0.237197 371 Not Applicable 88 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-10 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3710-BS smRNA-Seq 0.391892 74 Not Applicable 29 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-11 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP3711-BS smRNA-Seq 1 3 Not Applicable 3 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-1 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP371-BS smRNA-Seq 0.683721 2,365 Not Applicable 1,617 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-2 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP372-BS smRNA-Seq 0.238019 626 Not Applicable 149 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-3 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP373-BS smRNA-Seq 0.241055 531 Not Applicable 128 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-4 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP374-BS smRNA-Seq 0.525547 137 Not Applicable 72 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-5 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP375-BS smRNA-Seq 0.224719 178 Not Applicable 40 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-6 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP376-BS smRNA-Seq 0.448276 58 Not Applicable 26 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-7 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP377-BS smRNA-Seq 0.0755016 1,894 Not Applicable 143 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-8 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP378-BS smRNA-Seq 0.700176 1,701 Not Applicable 1,191 Other total cell-free biofluid RNA Nephrotic Syndrome
Neptune_CTOT_Progress_Urine_37-9 NO Urine Urinary system structure EXR-MBITZ1NEPSAMP379-BS smRNA-Seq 0.849905 7,342 Not Applicable 6,240 Other total cell-free biofluid RNA Nephrotic Syndrome

Tags

  • No tags yet

Other Formats

JSON    XML
  • About
  • Blog
  • Help
  • FAQ
  • Downloads
  • API
  • iPhone App
  • Email updates
© 2026 The Scripps Research Institute. All rights reserved. (ver 94eefe6 )
  • Terms of Use