Dataset: Oct2015_Urine_ExRNA
To identify urinary RNA as non-invasive biomarkers for progression of chronic kidney disease. This is a dataset provided from...
To identify urinary RNA as non-invasive biomarkers for progression of chronic kidney disease. This is a dataset provided from Extracellular RNA Communication consortium (ERCC). More details is available at http://exrna-atlas.org/exat/datasets.
- Species:
- human
- Samples:
- 80
- Updated:
- Apr.05, 2017
- Registered:
- Apr.04, 2017
Factors:
| Sample | Cell Culture Source | Biofluid Name | Anatomical Location | Transcriptome Reads | Profiling Assay | Transcriptome Genome Ratio | Reference Genome Reads | Meets ERCC QC? | Biosample Metadata ID | RNA Isolation Kit | exRNA Source | Condition |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Neptune_Urine_33-10 | Not Applicable | Urine | Urinary system structure | 17 | smRNA-Seq | 0.73913 | 23 | NO | EXR-MBITZ1NEPSAMP3310-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-11 | Not Applicable | Urine | Urinary system structure | 1 | smRNA-Seq | 0.142857 | 7 | NO | EXR-MBITZ1NEPSAMP3311-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-12 | Not Applicable | Urine | Urinary system structure | 9 | smRNA-Seq | 0.204545 | 44 | NO | EXR-MBITZ1NEPSAMP3312-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-13 | Not Applicable | Urine | Urinary system structure | 2,561 | smRNA-Seq | 0.912362 | 2,807 | NO | EXR-MBITZ1NEPSAMP3313-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-14 | Not Applicable | Urine | Urinary system structure | 39 | smRNA-Seq | 0.128289 | 304 | NO | EXR-MBITZ1NEPSAMP3314-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-15 | Not Applicable | Urine | Urinary system structure | 406 | smRNA-Seq | 0.436559 | 930 | NO | EXR-MBITZ1NEPSAMP3315-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-17 | Not Applicable | Urine | Urinary system structure | 77 | smRNA-Seq | 0.226471 | 340 | NO | EXR-MBITZ1NEPSAMP3317-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-18 | Not Applicable | Urine | Urinary system structure | 1,003 | smRNA-Seq | 0.846414 | 1,185 | NO | EXR-MBITZ1NEPSAMP3318-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-19 | Not Applicable | Urine | Urinary system structure | 13 | smRNA-Seq | 0.419355 | 31 | NO | EXR-MBITZ1NEPSAMP3319-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-1 | Not Applicable | Urine | Urinary system structure | 83 | smRNA-Seq | 0.482558 | 172 | NO | EXR-MBITZ1NEPSAMP331-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-20 | Not Applicable | Urine | Urinary system structure | 30 | smRNA-Seq | 0.291262 | 103 | NO | EXR-MBITZ1NEPSAMP3320-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-21 | Not Applicable | Urine | Urinary system structure | 254 | smRNA-Seq | 0.490347 | 518 | NO | EXR-MBITZ1NEPSAMP3321-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-22 | Not Applicable | Urine | Urinary system structure | 10 | smRNA-Seq | 0.116279 | 86 | NO | EXR-MBITZ1NEPSAMP3322-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-23 | Not Applicable | Urine | Urinary system structure | 9 | smRNA-Seq | 1 | 9 | NO | EXR-MBITZ1NEPSAMP3323-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-24 | Not Applicable | Urine | Urinary system structure | NA | smRNA-Seq | NA | 10 | NO | EXR-MBITZ1NEPSAMP3324-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-2 | Not Applicable | Urine | Urinary system structure | 112 | smRNA-Seq | 0.319088 | 351 | NO | EXR-MBITZ1NEPSAMP332-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-3 | Not Applicable | Urine | Urinary system structure | 380 | smRNA-Seq | 0.558003 | 681 | NO | EXR-MBITZ1NEPSAMP333-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-4 | Not Applicable | Urine | Urinary system structure | 24 | smRNA-Seq | 0.266667 | 90 | NO | EXR-MBITZ1NEPSAMP334-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-5 | Not Applicable | Urine | Urinary system structure | 7 | smRNA-Seq | 0.5 | 14 | NO | EXR-MBITZ1NEPSAMP335-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-6 | Not Applicable | Urine | Urinary system structure | 10 | smRNA-Seq | 0.285714 | 35 | NO | EXR-MBITZ1NEPSAMP336-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-7 | Not Applicable | Urine | Urinary system structure | 17 | smRNA-Seq | 0.68 | 25 | NO | EXR-MBITZ1NEPSAMP337-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-8 | Not Applicable | Urine | Urinary system structure | 199 | smRNA-Seq | 0.514212 | 387 | NO | EXR-MBITZ1NEPSAMP338-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_33-9 | Not Applicable | Urine | Urinary system structure | 2,967 | smRNA-Seq | 0.148217 | 20,018 | NO | EXR-MBITZ1NEPSAMP339-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-10 | Not Applicable | Urine | Urinary system structure | 29 | smRNA-Seq | 0.292929 | 99 | NO | EXR-MBITZ1NEPSAMP3510-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-11 | Not Applicable | Urine | Urinary system structure | 24 | smRNA-Seq | 0.666667 | 36 | NO | EXR-MBITZ1NEPSAMP3511-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-12 | Not Applicable | Urine | Urinary system structure | 3 | smRNA-Seq | 0.230769 | 13 | NO | EXR-MBITZ1NEPSAMP3512-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-13 | Not Applicable | Urine | Urinary system structure | 1,640 | smRNA-Seq | 0.957385 | 1,713 | NO | EXR-MBITZ1NEPSAMP3513-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-15 | Not Applicable | Urine | Urinary system structure | 35 | smRNA-Seq | 0.686275 | 51 | NO | EXR-MBITZ1NEPSAMP3515-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-16 | Not Applicable | Urine | Urinary system structure | 481 | smRNA-Seq | 0.266187 | 1,807 | NO | EXR-MBITZ1NEPSAMP3516-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-17 | Not Applicable | Urine | Urinary system structure | 901 | smRNA-Seq | 0.702808 | 1,282 | NO | EXR-MBITZ1NEPSAMP3517-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-18 | Not Applicable | Urine | Urinary system structure | 975 | smRNA-Seq | 0.816583 | 1,194 | NO | EXR-MBITZ1NEPSAMP3518-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-19 | Not Applicable | Urine | Urinary system structure | 5 | smRNA-Seq | 0.135135 | 37 | NO | EXR-MBITZ1NEPSAMP3519-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-1 | Not Applicable | Urine | Urinary system structure | 58 | smRNA-Seq | 0.222222 | 261 | NO | EXR-MBITZ1NEPSAMP351-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-20 | Not Applicable | Urine | Urinary system structure | 21 | smRNA-Seq | 0.196262 | 107 | NO | EXR-MBITZ1NEPSAMP3520-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-21 | Not Applicable | Urine | Urinary system structure | 173 | smRNA-Seq | 0.284539 | 608 | NO | EXR-MBITZ1NEPSAMP3521-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-22 | Not Applicable | Urine | Urinary system structure | 158 | smRNA-Seq | 0.124019 | 1,274 | NO | EXR-MBITZ1NEPSAMP3522-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-23 | Not Applicable | Urine | Urinary system structure | 473 | smRNA-Seq | 0.863139 | 548 | NO | EXR-MBITZ1NEPSAMP3523-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-24 | Not Applicable | Urine | Urinary system structure | 33 | smRNA-Seq | 0.464789 | 71 | NO | EXR-MBITZ1NEPSAMP3524-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-2 | Not Applicable | Urine | Urinary system structure | 162 | smRNA-Seq | 0.347639 | 466 | NO | EXR-MBITZ1NEPSAMP352-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-3 | Not Applicable | Urine | Urinary system structure | 595 | smRNA-Seq | 0.388635 | 1,531 | NO | EXR-MBITZ1NEPSAMP353-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-4 | Not Applicable | Urine | Urinary system structure | 165 | smRNA-Seq | 0.6 | 275 | NO | EXR-MBITZ1NEPSAMP354-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-5 | Not Applicable | Urine | Urinary system structure | 89 | smRNA-Seq | 0.413953 | 215 | NO | EXR-MBITZ1NEPSAMP355-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-6 | Not Applicable | Urine | Urinary system structure | 27 | smRNA-Seq | 0.171975 | 157 | NO | EXR-MBITZ1NEPSAMP356-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-7 | Not Applicable | Urine | Urinary system structure | 169 | smRNA-Seq | 0.673307 | 251 | NO | EXR-MBITZ1NEPSAMP357-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-8 | Not Applicable | Urine | Urinary system structure | 240 | smRNA-Seq | 0.560748 | 428 | NO | EXR-MBITZ1NEPSAMP358-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_35-9 | Not Applicable | Urine | Urinary system structure | 8,824 | smRNA-Seq | 0.894113 | 9,869 | NO | EXR-MBITZ1NEPSAMP359-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-10 | Not Applicable | Urine | Urinary system structure | 46 | smRNA-Seq | 0.326241 | 141 | NO | EXR-MBITZ1NEPSAMP3610-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-11 | Not Applicable | Urine | Urinary system structure | 85 | smRNA-Seq | 0.669291 | 127 | NO | EXR-MBITZ1NEPSAMP3611-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-12 | Not Applicable | Urine | Urinary system structure | 72 | smRNA-Seq | 0.265683 | 271 | NO | EXR-MBITZ1NEPSAMP3612-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-14 | Not Applicable | Urine | Urinary system structure | 213 | smRNA-Seq | 0.282493 | 754 | NO | EXR-MBITZ1NEPSAMP3614-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-15 | Not Applicable | Urine | Urinary system structure | 392 | smRNA-Seq | 0.0727273 | 5,390 | NO | EXR-MBITZ1NEPSAMP3615-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-16 | Not Applicable | Urine | Urinary system structure | 79 | smRNA-Seq | 0.142342 | 555 | NO | EXR-MBITZ1NEPSAMP3616-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-17 | Not Applicable | Urine | Urinary system structure | 832 | smRNA-Seq | 0.623221 | 1,335 | NO | EXR-MBITZ1NEPSAMP3617-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-18 | Not Applicable | Urine | Urinary system structure | 3,827 | smRNA-Seq | 0.895624 | 4,273 | NO | EXR-MBITZ1NEPSAMP3618-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-19 | Not Applicable | Urine | Urinary system structure | 90 | smRNA-Seq | 0.271084 | 332 | NO | EXR-MBITZ1NEPSAMP3619-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-1 | Not Applicable | Urine | Urinary system structure | 401 | smRNA-Seq | 0.505038 | 794 | NO | EXR-MBITZ1NEPSAMP361-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-20 | Not Applicable | Urine | Urinary system structure | 1,730 | smRNA-Seq | 0.855166 | 2,023 | NO | EXR-MBITZ1NEPSAMP3620-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-21 | Not Applicable | Urine | Urinary system structure | 4,087 | smRNA-Seq | 0.541755 | 7,544 | NO | EXR-MBITZ1NEPSAMP3621-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-22 | Not Applicable | Urine | Urinary system structure | 175 | smRNA-Seq | 0.404157 | 433 | NO | EXR-MBITZ1NEPSAMP3622-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-23 | Not Applicable | Urine | Urinary system structure | 4,526 | smRNA-Seq | 0.934545 | 4,843 | NO | EXR-MBITZ1NEPSAMP3623-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-24 | Not Applicable | Urine | Urinary system structure | 281 | smRNA-Seq | 0.682039 | 412 | NO | EXR-MBITZ1NEPSAMP3624-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-2 | Not Applicable | Urine | Urinary system structure | 123 | smRNA-Seq | 0.232514 | 529 | NO | EXR-MBITZ1NEPSAMP362-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-3 | Not Applicable | Urine | Urinary system structure | 338 | smRNA-Seq | 0.517611 | 653 | NO | EXR-MBITZ1NEPSAMP363-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-4 | Not Applicable | Urine | Urinary system structure | 185 | smRNA-Seq | 0.417607 | 443 | NO | EXR-MBITZ1NEPSAMP364-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-5 | Not Applicable | Urine | Urinary system structure | 45 | smRNA-Seq | 0.849057 | 53 | NO | EXR-MBITZ1NEPSAMP365-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-6 | Not Applicable | Urine | Urinary system structure | 47 | smRNA-Seq | 0.0744849 | 631 | NO | EXR-MBITZ1NEPSAMP366-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-7 | Not Applicable | Urine | Urinary system structure | 477 | smRNA-Seq | 0.358377 | 1,331 | NO | EXR-MBITZ1NEPSAMP367-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-8 | Not Applicable | Urine | Urinary system structure | 957 | smRNA-Seq | 0.658637 | 1,453 | NO | EXR-MBITZ1NEPSAMP368-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_Urine_36-9 | Not Applicable | Urine | Urinary system structure | 88 | smRNA-Seq | 0.237197 | 371 | NO | EXR-MBITZ1NEPSAMP369-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-10 | Not Applicable | Urine | Urinary system structure | 29 | smRNA-Seq | 0.391892 | 74 | NO | EXR-MBITZ1NEPSAMP3710-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-11 | Not Applicable | Urine | Urinary system structure | 3 | smRNA-Seq | 1 | 3 | NO | EXR-MBITZ1NEPSAMP3711-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-1 | Not Applicable | Urine | Urinary system structure | 1,617 | smRNA-Seq | 0.683721 | 2,365 | NO | EXR-MBITZ1NEPSAMP371-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-2 | Not Applicable | Urine | Urinary system structure | 149 | smRNA-Seq | 0.238019 | 626 | NO | EXR-MBITZ1NEPSAMP372-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-3 | Not Applicable | Urine | Urinary system structure | 128 | smRNA-Seq | 0.241055 | 531 | NO | EXR-MBITZ1NEPSAMP373-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-4 | Not Applicable | Urine | Urinary system structure | 72 | smRNA-Seq | 0.525547 | 137 | NO | EXR-MBITZ1NEPSAMP374-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-5 | Not Applicable | Urine | Urinary system structure | 40 | smRNA-Seq | 0.224719 | 178 | NO | EXR-MBITZ1NEPSAMP375-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-6 | Not Applicable | Urine | Urinary system structure | 26 | smRNA-Seq | 0.448276 | 58 | NO | EXR-MBITZ1NEPSAMP376-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-7 | Not Applicable | Urine | Urinary system structure | 143 | smRNA-Seq | 0.0755016 | 1,894 | NO | EXR-MBITZ1NEPSAMP377-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-8 | Not Applicable | Urine | Urinary system structure | 1,191 | smRNA-Seq | 0.700176 | 1,701 | NO | EXR-MBITZ1NEPSAMP378-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |
| Neptune_CTOT_Progress_Urine_37-9 | Not Applicable | Urine | Urinary system structure | 6,240 | smRNA-Seq | 0.849905 | 7,342 | NO | EXR-MBITZ1NEPSAMP379-BS | Other | total cell-free biofluid RNA | Nephrotic Syndrome |