Dataset: UH2 40 Samples Seq
Extracellular RNA from the plasma of 40 individuals from the Framingham Heart Study were isolated using miRCURY RNA isolation kit...
Extracellular RNA from the plasma of 40 individuals from the Framingham Heart Study were isolated using miRCURY RNA isolation kit Biofluids (Exiqon). Small RNA Library preparation was done with Ion Total RNA-Seq Kit v2 (Thermo Fisher Scientific) and the samples were sequenced with the Ion Proton. This is a dataset provided from Extracellular RNA Communication consortium (ERCC). More details is available at http://exrna-atlas.org/exat/datasets.
- Species:
- human
- Samples:
- 39
- PubMed:
- 27112789
- Updated:
- Apr.05, 2017
- Registered:
- Apr.04, 2017
Factors:
Sample | Cell Culture Source | Biofluid Name | Anatomical Location | Biosample Metadata ID | Profiling Assay | Transcriptome Genome Ratio | Reference Genome Reads | Meets ERCC QC? | Transcriptome Reads | RNA Isolation Kit | exRNA Source | Condition |
---|---|---|---|---|---|---|---|---|---|---|---|---|
11020 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE11020-BS | smRNA-Seq | 0.896134 | 605,434 | YES | 542,550 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
11066 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE11066-BS | smRNA-Seq | 0.866619 | 311,154 | YES | 269,652 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
11095 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE11095-BS | smRNA-Seq | 0.86556 | 385,613 | YES | 333,771 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
11120 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE11120-BS | smRNA-Seq | 0.906389 | 183,814 | YES | 166,607 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
11430 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE11430-BS | smRNA-Seq | 0.8688 | 841,645 | YES | 731,229 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
11579 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE11579-BS | smRNA-Seq | 0.746617 | 246,114 | YES | 183,753 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
11610 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE11610-BS | smRNA-Seq | 0.93647 | 1,076,046 | YES | 1,007,685 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
10172 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10172-BS | smRNA-Seq | 0.768581 | 359,245 | YES | 276,109 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
10216 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10216-BS | smRNA-Seq | 0.945584 | 1,586,770 | YES | 1,500,424 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
10021 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10021-BS | smRNA-Seq | 0.83462 | 251,893 | YES | 210,235 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
12303 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE12303-BS | smRNA-Seq | 0.788773 | 268,299 | YES | 211,627 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
12616 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE12616-BS | smRNA-Seq | 0.790398 | 165,361 | YES | 130,701 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
12768 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE12768-BS | smRNA-Seq | 0.953922 | 1,309,735 | YES | 1,249,385 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
12918 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE12918-BS | smRNA-Seq | 0.938385 | 1,166,928 | YES | 1,095,028 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
12938 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE12938-BS | smRNA-Seq | 0.716815 | 123,209 | NO | 88,318 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
13132 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE13132-BS | smRNA-Seq | 0.826711 | 214,422 | YES | 177,265 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
13170 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE13170-BS | smRNA-Seq | 0.751055 | 101,882 | NO | 76,519 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
10320 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10320-BS | smRNA-Seq | 0.946026 | 859,306 | YES | 812,926 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
13392 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE13392-BS | smRNA-Seq | 0.838254 | 290,943 | YES | 243,884 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
13464 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE13464-BS | smRNA-Seq | 0.713995 | 83,572 | NO | 59,670 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
13713 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE13713-BS | smRNA-Seq | 0.822151 | 181,165 | YES | 148,945 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
14043 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE14043-BS | smRNA-Seq | 0.834504 | 213,105 | YES | 177,837 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
14820 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE14820-BS | smRNA-Seq | 0.80196 | 219,319 | YES | 175,885 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
14912 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE14912-BS | smRNA-Seq | 0.701753 | 66,190 | NO | 46,449 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
10500 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10500-BS | smRNA-Seq | 0.689864 | 131,310 | NO | 90,586 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
15237 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE15237-BS | smRNA-Seq | 0.822248 | 183,644 | YES | 151,001 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
10543 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10543-BS | smRNA-Seq | 0.757923 | 121,135 | NO | 91,811 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
10590 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10590-BS | smRNA-Seq | 0.842146 | 178,266 | YES | 150,126 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
16077 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE16077-BS | smRNA-Seq | 0.953763 | 1,445,706 | YES | 1,378,861 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
16136 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE16136-BS | smRNA-Seq | 0.825893 | 189,315 | YES | 156,354 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
16355 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE16355-BS | smRNA-Seq | 0.908901 | 800,415 | YES | 727,498 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
16684 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE16684-BS32 | smRNA-Seq | 0.825828 | 356,831 | YES | 294,681 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
16758 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE16758-BS | smRNA-Seq | 0.766947 | 241,971 | YES | 185,579 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
10676 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10676-BS | smRNA-Seq | 0.943756 | 1,092,977 | YES | 1,031,504 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
16926 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE16926-BS | smRNA-Seq | 0.868186 | 205,638 | YES | 178,532 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
17138 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE17138-BS | smRNA-Seq | 0.804494 | 367,084 | YES | 295,317 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
17226 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE17226-BS | smRNA-Seq | 0.765965 | 608,858 | YES | 466,364 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |
10728 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE10728-BS | smRNA-Seq | 0.770573 | 167,051 | YES | 128,725 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Cardiovascular Disorder |
17326 | Not Applicable | Plasma | Entire cardiovascular system | EXR-JFREE17326-BS | smRNA-Seq | 0.750356 | 186,185 | YES | 139,705 | miRcury biofluids (Exiqon) | total cell-free biofluid RNA | Healthy Control |