Dataset: UH2 40 Samples Seq

Extracellular RNA from the plasma of 40 individuals from the Framingham Heart Study were isolated using miRCURY RNA isolation kit...

Registered by ERCC

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Extracellular RNA from the plasma of 40 individuals from the Framingham Heart Study were isolated using miRCURY RNA isolation kit Biofluids (Exiqon). Small RNA Library preparation was done with Ion Total RNA-Seq Kit v2 (Thermo Fisher Scientific) and the samples were sequenced with the Ion Proton. This is a dataset provided from Extracellular RNA Communication consortium (ERCC). More details is available at http://exrna-atlas.org/exat/datasets.

Species:: human
Samples:: 39
PubMed:: 27112789
Updated:: Apr.05, 2017
Registered:: Apr.04, 2017

Factors:

Sample	Meets ERCC QC?	Biofluid Name	Anatomical Location	Biosample Metadata ID	Profiling Assay	Transcriptome Genome Ratio	Reference Genome Reads	Cell Culture Source	Transcriptome Reads	RNA Isolation Kit	exRNA Source	Condition
11020	YES	Plasma	Entire cardiovascular system	EXR-JFREE11020-BS	smRNA-Seq	0.896134	605,434	Not Applicable	542,550	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
11066	YES	Plasma	Entire cardiovascular system	EXR-JFREE11066-BS	smRNA-Seq	0.866619	311,154	Not Applicable	269,652	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
11095	YES	Plasma	Entire cardiovascular system	EXR-JFREE11095-BS	smRNA-Seq	0.86556	385,613	Not Applicable	333,771	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
11120	YES	Plasma	Entire cardiovascular system	EXR-JFREE11120-BS	smRNA-Seq	0.906389	183,814	Not Applicable	166,607	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
11430	YES	Plasma	Entire cardiovascular system	EXR-JFREE11430-BS	smRNA-Seq	0.8688	841,645	Not Applicable	731,229	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
11579	YES	Plasma	Entire cardiovascular system	EXR-JFREE11579-BS	smRNA-Seq	0.746617	246,114	Not Applicable	183,753	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
11610	YES	Plasma	Entire cardiovascular system	EXR-JFREE11610-BS	smRNA-Seq	0.93647	1,076,046	Not Applicable	1,007,685	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
10172	YES	Plasma	Entire cardiovascular system	EXR-JFREE10172-BS	smRNA-Seq	0.768581	359,245	Not Applicable	276,109	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
10216	YES	Plasma	Entire cardiovascular system	EXR-JFREE10216-BS	smRNA-Seq	0.945584	1,586,770	Not Applicable	1,500,424	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
10021	YES	Plasma	Entire cardiovascular system	EXR-JFREE10021-BS	smRNA-Seq	0.83462	251,893	Not Applicable	210,235	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
12303	YES	Plasma	Entire cardiovascular system	EXR-JFREE12303-BS	smRNA-Seq	0.788773	268,299	Not Applicable	211,627	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
12616	YES	Plasma	Entire cardiovascular system	EXR-JFREE12616-BS	smRNA-Seq	0.790398	165,361	Not Applicable	130,701	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
12768	YES	Plasma	Entire cardiovascular system	EXR-JFREE12768-BS	smRNA-Seq	0.953922	1,309,735	Not Applicable	1,249,385	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
12918	YES	Plasma	Entire cardiovascular system	EXR-JFREE12918-BS	smRNA-Seq	0.938385	1,166,928	Not Applicable	1,095,028	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
12938	NO	Plasma	Entire cardiovascular system	EXR-JFREE12938-BS	smRNA-Seq	0.716815	123,209	Not Applicable	88,318	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
13132	YES	Plasma	Entire cardiovascular system	EXR-JFREE13132-BS	smRNA-Seq	0.826711	214,422	Not Applicable	177,265	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
13170	NO	Plasma	Entire cardiovascular system	EXR-JFREE13170-BS	smRNA-Seq	0.751055	101,882	Not Applicable	76,519	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
10320	YES	Plasma	Entire cardiovascular system	EXR-JFREE10320-BS	smRNA-Seq	0.946026	859,306	Not Applicable	812,926	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
13392	YES	Plasma	Entire cardiovascular system	EXR-JFREE13392-BS	smRNA-Seq	0.838254	290,943	Not Applicable	243,884	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
13464	NO	Plasma	Entire cardiovascular system	EXR-JFREE13464-BS	smRNA-Seq	0.713995	83,572	Not Applicable	59,670	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
13713	YES	Plasma	Entire cardiovascular system	EXR-JFREE13713-BS	smRNA-Seq	0.822151	181,165	Not Applicable	148,945	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
14043	YES	Plasma	Entire cardiovascular system	EXR-JFREE14043-BS	smRNA-Seq	0.834504	213,105	Not Applicable	177,837	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
14820	YES	Plasma	Entire cardiovascular system	EXR-JFREE14820-BS	smRNA-Seq	0.80196	219,319	Not Applicable	175,885	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
14912	NO	Plasma	Entire cardiovascular system	EXR-JFREE14912-BS	smRNA-Seq	0.701753	66,190	Not Applicable	46,449	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
10500	NO	Plasma	Entire cardiovascular system	EXR-JFREE10500-BS	smRNA-Seq	0.689864	131,310	Not Applicable	90,586	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
15237	YES	Plasma	Entire cardiovascular system	EXR-JFREE15237-BS	smRNA-Seq	0.822248	183,644	Not Applicable	151,001	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
10543	NO	Plasma	Entire cardiovascular system	EXR-JFREE10543-BS	smRNA-Seq	0.757923	121,135	Not Applicable	91,811	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
10590	YES	Plasma	Entire cardiovascular system	EXR-JFREE10590-BS	smRNA-Seq	0.842146	178,266	Not Applicable	150,126	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
16077	YES	Plasma	Entire cardiovascular system	EXR-JFREE16077-BS	smRNA-Seq	0.953763	1,445,706	Not Applicable	1,378,861	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
16136	YES	Plasma	Entire cardiovascular system	EXR-JFREE16136-BS	smRNA-Seq	0.825893	189,315	Not Applicable	156,354	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
16355	YES	Plasma	Entire cardiovascular system	EXR-JFREE16355-BS	smRNA-Seq	0.908901	800,415	Not Applicable	727,498	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
16684	YES	Plasma	Entire cardiovascular system	EXR-JFREE16684-BS32	smRNA-Seq	0.825828	356,831	Not Applicable	294,681	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
16758	YES	Plasma	Entire cardiovascular system	EXR-JFREE16758-BS	smRNA-Seq	0.766947	241,971	Not Applicable	185,579	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
10676	YES	Plasma	Entire cardiovascular system	EXR-JFREE10676-BS	smRNA-Seq	0.943756	1,092,977	Not Applicable	1,031,504	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
16926	YES	Plasma	Entire cardiovascular system	EXR-JFREE16926-BS	smRNA-Seq	0.868186	205,638	Not Applicable	178,532	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
17138	YES	Plasma	Entire cardiovascular system	EXR-JFREE17138-BS	smRNA-Seq	0.804494	367,084	Not Applicable	295,317	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
17226	YES	Plasma	Entire cardiovascular system	EXR-JFREE17226-BS	smRNA-Seq	0.765965	608,858	Not Applicable	466,364	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control
10728	YES	Plasma	Entire cardiovascular system	EXR-JFREE10728-BS	smRNA-Seq	0.770573	167,051	Not Applicable	128,725	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Cardiovascular Disorder
17326	YES	Plasma	Entire cardiovascular system	EXR-JFREE17326-BS	smRNA-Seq	0.750356	186,185	Not Applicable	139,705	miRcury biofluids (Exiqon)	total cell-free biofluid RNA	Healthy Control