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<biogps><data><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="popularity">0.0</item><item key="description">Search a Gene in a  HGDP - CEPH Human Genome Diversity Genotype Database V3.0.

Working example gene="THRAP3"</item><item key="tags"><item>gene</item><item>genetics</item><item>map</item><item>markers</item><item>snp</item></item><item key="url">http://www.cephb.fr/common/marker/markers.php?value_crit={{symbol}}&amp;dbase_crit=gene_symbol&amp;Submit=OK</item><item key="lastmodified">2016-03-23 14:51:22</item><item key="usage_data"><item key="layouts">0.0</item><item key="users">0</item></item><item key="created">2016-03-23 14:49:26</item><item key="id">1218</item><item key="shortUrl">www.cephb.fr</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">HGDP Gene</item><item key="in">plugin</item><item key="owner"><item key="username">yokofakun</item><item key="url">/profile/3118/yokofakun</item><item key="name">Pierre Lindenbaum</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item></item><item key="name">CEPH</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="popularity">0</item><item key="description"> Atlas allows searching for both validated and putative miRs binding genes of interest.  May be searched by gene, miR, pathway, disease, and many more options.</item><item key="tags"><item>mirna</item></item><item key="url">http://zmf.umm.uni-heidelberg.de/apps/zmf/mirwalk2/</item><item key="lastmodified">2016-03-25 15:07:32</item><item key="usage_data"><item key="layouts">0</item><item key="users">0</item></item><item key="created">2016-03-25 15:07:32</item><item key="id">1220</item><item key="shortUrl">zmf.umm.uni-heidelberg.de</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">Atlas for predicted and validated miRNA-target interactions</item><item key="in">plugin</item><item key="owner"><item key="username">hkinkead</item><item key="url">/profile/4701/hkinkead</item><item key="name">Heather Kinkead</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>zebrafish</item><item>thale-cress</item></item><item key="name">miRWalk 2.0</item></item><item><item key="rating_data"><item key="avg_stars">10</item><item key="total">1</item><item key="avg">5</item></item><item key="options">None</item><item key="popularity">0.0</item><item key="description">DIANA-TarBase is a manually curated catalogue of more than half a million published experimentally validated miRNA-gene interactions.  It identifies both positive or negative experimental results, the utilized experimental methodology, experimental conditions including cell/tissue type and treatment. Searches can be done through gene or miRNA names.</item><item key="tags"><item>microrna</item><item>mirna</item><item>regulation</item><item>target</item></item><item key="url">http://diana.imis.athena-innovation.gr/DianaTools/index.php?r=tarbase/index&amp;genes={{symbol}}</item><item key="lastmodified">2016-05-04 15:01:17</item><item key="usage_data"><item key="layouts">0.0</item><item key="users">0</item></item><item key="created">2016-05-04 15:01:16</item><item key="id">1225</item><item key="shortUrl">diana.imis.athena-innovation.gr</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">microRNA-target interactions database</item><item key="in">plugin</item><item key="owner"><item key="username">eyleen.corrales</item><item key="url">/profile/9858/eyleen.corrales</item><item key="name">Eyleen Corrales</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item><item>thale-cress</item><item>frog</item></item><item key="name">DIANA-TarBase v7.0</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="popularity">0.0</item><item key="description">MyGene2 is a portal through which families with rare genetic conditions who are interested in sharing their health and genetic information can connect with other families, clinicians, and researchers. The genetic cause of most rare conditions is unknown and as a result, most families who undergo exome sequencing or whole genome sequencing do not receive a diagnosis. By sharing information through MyGene2, a family can help and even participate in the discovery of new genetic conditions and the genes underlying these conditions.

Families with rare genetic conditions may use MyGene2 to search for and contact other families who have the same condition or mutations in the same gene in order to share information and offer support. Families have the option to make the information they submit to MyGene2 available to anyone visiting the site (i.e., public) or available to only registered users who have also contributed data to MyGene2. Families also have the choice of whether or not they want to be contacted by clinicians and researchers or other families.

Clinicians who have evaluated families with rare conditions may use MyGene2 to identify and contact families with the same rare condition and / or candidate gene.

Researchers studying a gene or families with a rare condition may use MyGene2 to identify and contact other families who have the same rare condition or candidate gene.</item><item key="tags"><item>gene</item><item>genetic-disorder</item><item>genetics</item><item>variant</item></item><item key="url">https://mygene2.org/MyGene2/variantsbygene?gene={{symbol}}</item><item key="lastmodified">2016-06-28 23:34:16</item><item key="usage_data"><item key="layouts">0.0</item><item key="users">0</item></item><item key="created">2016-06-28 23:34:04</item><item key="id">1232</item><item key="shortUrl">mygene2.org</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">MyGene2 is a portal through which families with rare genetic conditions can connect with other families, clinicians, and researchers.</item><item key="in">plugin</item><item key="owner"><item key="username">cwu</item><item key="url">/profile/2/cwu</item><item key="name">Chunlei Wu</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item></item><item key="name">MyGene2</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="description"> </item><item key="created">2017-05-24 19:42:04</item><item key="url">ciliac</item><item key="lastmodified">2017-05-24 19:42:04</item><item key="usage_data"><item key="layouts">0</item><item key="users">0</item></item><item key="popularity">0</item><item key="id">1249</item><item key="shortUrl">ciliac</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description"/><item key="in">plugin</item><item key="owner"><item key="username">motaz</item><item key="url">/profile/10603/motaz</item><item key="name">motaz</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item><item>thale-cress</item><item>frog</item><item>pig</item></item><item key="name">CYCS</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="description"> </item><item key="created">2017-12-14 23:31:04</item><item key="url">http://www.ncbi.nlm.nih.gov/pubmed/?term=Albumin+AND+{{Symbol}}</item><item key="lastmodified">2017-12-14 23:31:04</item><item key="usage_data"><item key="layouts">0</item><item key="users">0</item></item><item key="popularity">0</item><item key="id">1256</item><item key="shortUrl">www.ncbi.nlm.nih.gov</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description"/><item key="in">plugin</item><item key="owner"><item key="username">chrau</item><item key="url">/profile/5666/chrau</item><item key="name">chrau</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item><item>thale-cress</item><item>frog</item><item>pig</item></item><item key="name">Albumin Pubmed</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="description"> </item><item key="created">2018-05-22 08:40:01</item><item key="url">https://japantobacco.ussc.informatics.illumina.com/c/nextbio.nb</item><item key="lastmodified">2018-05-22 08:40:01</item><item key="usage_data"><item key="layouts">0</item><item key="users">0</item></item><item key="popularity">0</item><item key="id">1268</item><item key="shortUrl">japantobacco.ussc.informatics.illumina.com</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description"/><item key="in">plugin</item><item key="owner"><item key="username">Shiraki</item><item key="url">/profile/11131/Shiraki</item><item key="name">Shiraki</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item><item>thale-cress</item><item>frog</item><item>pig</item></item><item key="name">BaseSpace</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="popularity">0</item><item key="description">RNA sequencing (RNA-seq) is the leading technology for genome-wide transcript quantification. However, publicly available RNA-seq data is currently provided mostly in raw form, a significant barrier for global and integrative retrospective analyses. ARCHS4 is a web resource that makes the majority of published RNA-seq data from human and mouse available at the gene and transcript levels. For developing ARCHS4, available FASTQ files from RNA-seq experiments from the Gene Expression Omnibus (GEO) were aligned using a cloud-based infrastructure. In total 187,946 samples are accessible through ARCHS4 with 103,083 mouse and 84,863 human. Additionally, the ARCHS4 web interface provides intuitive exploration of the processed data through querying tools, interactive visualization, and gene pages that provide average expression across cell lines and tissues, top co-expressed genes for each gene, and predicted biological functions and protein-protein interactions for each gene based on prior knowledge combined with co-expression. See https://www.ncbi.nlm.nih.gov/pubmed/29636450</item><item key="tags"><item>rna-seq</item></item><item key="url">https://amp.pharm.mssm.edu/archs4/gene/{{symbol}}</item><item key="lastmodified">2018-06-18 15:01:13</item><item key="usage_data"><item key="layouts">0</item><item key="users">0</item></item><item key="created">2018-06-18 15:01:13</item><item key="id">1270</item><item key="shortUrl">amp.pharm.mssm.edu</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">ARCHS4 is a web resource that makes the majority of published RNA-seq data from human and mouse available at the gene and transcript levels</item><item key="in">plugin</item><item key="owner"><item key="username">gtsueng</item><item key="url">/profile/7731/gtsueng</item><item key="name">gtsueng</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item></item><item key="name">ARCHS4</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="description"> </item><item key="created">2018-10-09 01:26:05</item><item key="url">http://lifeome.net/database/hccdb/search.html</item><item key="lastmodified">2018-10-09 01:26:05</item><item key="usage_data"><item key="layouts">0</item><item key="users">0</item></item><item key="popularity">0</item><item key="id">1275</item><item key="shortUrl">lifeome.net</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description"/><item key="in">plugin</item><item key="owner"><item key="username">MZCS</item><item key="url">/profile/11065/MZCS</item><item key="name">MZCS</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item><item>thale-cress</item><item>frog</item><item>pig</item></item><item key="name">lifeome</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="description"> </item><item key="created">2021-06-19 22:59:27</item><item key="url">https://www.wikigenes.org/e/gene/e/{{EntrezGene}}.html</item><item key="lastmodified">2021-06-19 22:59:27</item><item key="usage_data"><item key="layouts">0</item><item key="users">0</item></item><item key="popularity">0</item><item key="id">1282</item><item key="shortUrl">www.wikigenes.org</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description"/><item key="in">plugin</item><item key="owner"><item key="username">victor_trevino</item><item key="url">/profile/2323/victor_trevino</item><item key="name">Victor Trevino</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item><item>thale-cress</item><item>frog</item><item>pig</item></item><item key="name">WikiGenes</item></item></data></biogps>
