[{"rating_data": {"avg_stars": 10, "total": 1, "avg": 5}, "options": null, "popularity": 0.0, "description": "gpcrdb_search\n\nhttp://www.gpcr.org/7tm/search?q={{EntrezGene}}", "tags": ["gpcr"], "url": "http://www.gpcr.org/7tm/search?wicket:interface=:3:13::::", "lastmodified": "2012-09-28 08:19:35", "usage_data": {"layouts": 0.0, "users": 0}, "created": "2012-09-25 08:42:15", "id": 1045, "shortUrl": "www.gpcr.org", "role_permission": ["biogpsusers"], "short_description": "gpcrdb_search", "in": "plugin", "owner": {"username": "helios121", "url": "/profile/6052/helios121", "name": "helios121"}, "permission_style": "public", "type": "iframe", "species": ["human", "mouse", "rat", "fruitfly", "nematode", "zebrafish", "thale-cress", "frog", "pig"], "name": "GPCRDB"}, {"rating_data": {"avg_stars": 0, "total": 0, "avg": 0}, "options": null, "description": "", "created": "2013-01-30 21:44:00", "url": "http://discern.uits.iu.edu:8340/HAPPI/", "lastmodified": "2013-01-30 21:44:01", "usage_data": {"layouts": 0.0, "users": 0}, "popularity": 0.0, "id": 1083, "shortUrl": "discern.uits.iu.edu:8340", "role_permission": ["biogpsusers"], "short_description": "No summary provided.", "in": "plugin", "owner": {"username": "huangcha", "url": "/profile/6436/huangcha", "name": "huangcha"}, "permission_style": "public", "type": "iframe", "species": ["human", "mouse", "rat", "fruitfly", "nematode", "zebrafish", "thale-cress", "frog", "pig"], "name": "Happi"}, {"rating_data": {"avg_stars": 0, "total": 0, "avg": 0}, "options": null, "description": "", "created": "2013-03-06 04:36:13", "url": "/ext/googlescholarproxy/?q={{Symbol}}", "lastmodified": "2013-03-06 04:36:14", "usage_data": {"layouts": 0.0, "users": 0}, "popularity": 0.0, "id": 1088, "shortUrl": "biogps.org", "role_permission": ["biogpsusers"], "short_description": "This is my first plugin.", "in": "plugin", "owner": {"username": "yfu", "url": "/profile/6565/yfu", "name": "yfu"}, "permission_style": "public", "type": "iframe", "species": ["human", "mouse", "rat", "fruitfly", "nematode", "zebrafish", "thale-cress", "frog", "pig"], "name": "My First Plugin"}, {"rating_data": {"avg_stars": 0, "total": 0, "avg": 0}, "options": null, "popularity": 0.0, "description": "UniCarbKB is an initiative that aims to promote the creation of an online information storage and search platform for glycomics and glycobiology research. The knowledgebase will offer a freely accessible and information rich resource supported by querying interfaces, annotation technologies and the adoption of common standards to integrate structural, experimental and functional data. Through cross-referencing existing databases and information resources, the UniCarbKB framework endeavours to support the growth of glycobioinformatics and the dissemination of knowledge through the provision of an open and unified portal to encourage the sharing of data.", "tags": ["glycomics"], "url": "http://www.unicarbkb.org/proteinsummary/{{Uniprot}}", "lastmodified": "2013-04-08 09:33:09", "usage_data": {"layouts": 0.0, "users": 0}, "created": "2013-04-08 09:33:09", "id": 1103, "shortUrl": "www.unicarbkb.org", "role_permission": ["biogpsusers"], "short_description": "UniCarbKB aims to promote the creation of an online information storage and search platform for glycomics and glycobiology research", "in": "plugin", "owner": {"username": "asu", "url": "/profile/3/asu", "name": "Andrew Su"}, "permission_style": "public", "type": "iframe", "species": ["human", "mouse", "rat", "fruitfly", "nematode", "zebrafish", "thale-cress", "frog", "pig"], "name": "UniCarbKB"}, {"rating_data": {"avg_stars": 10, "total": 1, "avg": 5}, "options": null, "popularity": 0.0, "description": "Mutdb.org, from the Mooney Lab...\n\nThe goal of MutDB is to annotate human variation data with protein structural information and other functionally relevant information, if available. The mutations are organized by gene. ", "tags": ["annotation", "mutation", "protein"], "url": "http://mutdb.org/cgi-bin/mutdb.pl?id={{symbol}}&geneid={{entrezgene}}", "lastmodified": "2014-04-26 22:38:59", "usage_data": {"layouts": 0.0, "users": 0}, "created": "2014-04-26 22:38:00", "id": 1158, "shortUrl": "mutdb.org", "role_permission": ["biogpsusers"], "short_description": "The goal of MutDB is to annotate human variation data with protein structural information and other functionally relevant information", "in": "plugin", "owner": {"username": "asu", "url": "/profile/3/asu", "name": "Andrew Su"}, "permission_style": "public", "type": "iframe", "species": ["human"], "name": "MutDB"}, {"rating_data": {"avg_stars": 0, "total": 0, "avg": 0}, "options": null, "description": "", "created": "2014-04-30 15:17:14", "url": "http://drugable.com/search?query={{symbol}}", "lastmodified": "2014-04-30 15:17:15", "usage_data": {"layouts": 0.0, "users": 0}, "popularity": 0.0, "id": 1160, "shortUrl": "drugable.com", "role_permission": ["biogpsusers"], "short_description": "find drug interactions", "in": "plugin", "owner": {"username": "tamhok", "url": "/profile/7790/tamhok", "name": "tamhok"}, "permission_style": "public", "type": "iframe", "species": ["human", "mouse", "rat", "fruitfly", "nematode", "zebrafish", "thale-cress", "frog", "pig"], "name": "drugable"}, {"rating_data": {"avg_stars": 0, "total": 0, "avg": 0}, "options": {"certified_owner": true}, "popularity": 0.0, "description": "The LINCS program aims to generate an extensive reference set of cellular response signatures to a variety of small molecule and genetic perturbations. The goal is to create a sustainable and widely accessible knowledge resource to advance our understanding of the highly orchestrated interplay of molecular biological components in maintaining healthy development and how their perturbation causes disease.  The data sets produced at LINCS span a variety of assay formats and technologies, including biochemical and single cell phenotypic responses, and genome-wide transcriptional profiling. The success of this initiative critically relies on an effective informatics solution to integrate the various (current and future) data types generated in LINCS, as well as other large-scale screening efforts (such as the Molecular Libraries Probe Center Network, MLPCN) into coherent data sets and to make them accessible, interpretable, and actionable for scientists of different backgrounds and with different objectives. We propose to develop a novel knowledge-based, extensible information system of interconnected components that leverages semantic-web technologies and domain level ontologies. This system is called LIFE (LINCS Information FramEwork).\r\n\r\nThe long-term goal of the LIFE system is seamless \u201con-the fly\u201d data integration and analysis via a semantic \u201cLinked Data\u201d approach that is scalable with respect to information volume and complexity. LIFE will incorporate biomedical domain-level ontologies, including our recently developed BioAssay Ontology (BAO), to semantically associate related data types and to provide a knowledge context of the underlying experiments and screening outcomes.\r\n\r\nA key feature of LIFE will be the potential to derive novel implicit knowledge by various inference mechanisms; similar to how humans obtain insights by (mentally) connecting different pieces of information. The overarching goal of this proposed LIFE system is to help scientists to use data and results produced in the LINCSand other NIH screening programs in their own research and to support their translation towards the development of novel therapeutics.\r\n", "tags": ["lincs", "screening"], "url": "http://life.ccs.miami.edu/life/summary?mode=Protein&input={{entrezgene}}&source=Entrez", "lastmodified": "2014-12-05 00:15:54", "usage_data": {"layouts": 0.0, "users": 0}, "created": "2014-11-06 18:57:13", "id": 1172, "shortUrl": "life.ccs.miami.edu", "role_permission": ["biogpsusers"], "short_description": "Providing access to LINCS data sets and to make them accessible, interpretable, and actionable", "in": "plugin", "owner": {"username": "cchung", "url": "/profile/8509/cchung", "name": "Caty Chung"}, "permission_style": "public", "type": "iframe", "species": ["human"], "name": "LINCS Information FramEwork (LIFE)"}, {"rating_data": {"avg_stars": 0, "total": 0, "avg": 0}, "options": null, "popularity": 0.0, "description": "aging", "tags": ["aging"], "url": "{{WormBase}}{{ensemblprotein}}{{symbol}}", "lastmodified": "2015-03-26 07:04:21", "usage_data": {"layouts": 0.0, "users": 0}, "created": "2015-03-26 07:01:23", "id": 1177, "shortUrl": "{{WormBase}}{{ensemblprotein}}{{symbol}}", "role_permission": ["biogpsusers"], "short_description": "to compare", "in": "plugin", "owner": {"username": "stanford", "url": "/profile/8926/stanford", "name": "stanford wu"}, "permission_style": "public", "type": "iframe", "species": ["human", "nematode"], "name": "C. elegans and Human"}, {"rating_data": {"avg_stars": 0, "total": 0, "avg": 0}, "options": null, "description": "", "created": "2015-09-25 08:25:10", "url": "www.google.com", "lastmodified": "2015-09-25 08:25:10", "usage_data": {"layouts": 0.0, "users": 0}, "popularity": 0.0, "id": 1196, "shortUrl": "www.google.com", "role_permission": ["biogpsusers"], "short_description": "No summary provided.", "in": "plugin", "owner": {"username": "a6523130", "url": "/profile/9372/a6523130", "name": "a6523130"}, "permission_style": "public", "type": "iframe", "species": ["human", "mouse", "rat", "fruitfly", "nematode", "zebrafish", "thale-cress", "frog", "pig"], "name": "google"}, {"rating_data": {"avg_stars": 0, "total": 0, "avg": 0}, "options": null, "description": " ", "created": "2016-02-21 23:21:14", "url": "http://www.informatics.jax.org/searchtool/Search.do?query={{symbol}}", "lastmodified": "2016-02-21 23:21:14", "usage_data": {"layouts": 0, "users": 0}, "popularity": 0, "id": 1211, "shortUrl": "www.informatics.jax.org", "role_permission": ["biogpsusers"], "short_description": "", "in": "plugin", "owner": {"username": "lilitmaria_", "url": "/profile/9690/lilitmaria_", "name": "Lilit Antonyan"}, "permission_style": "public", "type": "iframe", "species": ["human", "mouse", "rat", "fruitfly", "nematode", "zebrafish", "thale-cress", "frog", "pig"], "name": "MGI"}]