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<biogps><data><item><item key="rating_data"><item key="avg_stars">10</item><item key="total">1</item><item key="avg">5</item></item><item key="options">None</item><item key="popularity">3.0</item><item key="description"> </item><item key="tags"><item>heart</item><item>literature</item><item>text-mining</item></item><item key="url">https://pubmed.ncbi.nlm.nih.gov/?term=%28{{Symbol}}%29+AND+%28heart+OR+cardiac%29</item><item key="lastmodified">2025-03-31 15:02:47</item><item key="usage_data"><item key="layouts">3.0</item><item key="users">3</item></item><item key="created">2012-05-16 21:57:27</item><item key="id">989</item><item key="shortUrl">pubmed.ncbi.nlm.nih.gov</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">Search by Gene name for Cardiac-related results</item><item key="in">plugin</item><item key="owner"><item key="username">chrau</item><item key="url">/profile/5666/chrau</item><item key="name">chrau</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item><item>thale-cress</item><item>frog</item><item>pig</item></item><item key="name">Cardiac Pubmed Search</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options"><item key="allowedSpecies"><item>human</item></item></item><item key="description"/><item key="created">2010-08-11 16:51:47</item><item key="url">http://www.jbrowse.org/ucsc/hg19/index.html?loc={{genomelocation}}&amp;tracks=DNA,SNPs-130,EnsemblGenes,UCSCGenes,RefSeqGenes</item><item key="lastmodified">2011-05-03 22:47:37</item><item key="usage_data"><item key="layouts">3.0</item><item key="users">2</item></item><item key="popularity">3.0</item><item key="id">788</item><item key="shortUrl">www.jbrowse.org</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">No summary provided.</item><item key="in">plugin</item><item key="owner"><item key="username">asu</item><item key="url">/profile/3/asu</item><item key="name">Andrew Su</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item></item><item key="name">JBrowse demo</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options"><item key="allowedSpecies"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item></item></item><item key="popularity">3.0</item><item key="description">The NIF system aggregates a vast amount of information relevant to neuroscience.</item><item key="tags"><item>brain</item><item>neuron</item><item>neuroscience</item><item>nif</item><item>ucsd</item></item><item key="url">http://www.neuinfo.org/nif/nifgwt.html?query={{Symbol}}</item><item key="lastmodified">2011-05-03 22:48:55</item><item key="usage_data"><item key="layouts">3.0</item><item key="users">3</item></item><item key="created">2010-08-25 15:07:48</item><item key="id">790</item><item key="shortUrl">www.neuinfo.org</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">The NIF system aggregates a vast amount of information relevant to neuroscience.</item><item key="in">plugin</item><item key="owner"><item key="username">bgood</item><item key="url">/profile/2918/bgood</item><item key="name">Benjamin Good</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item></item><item key="name">NIF (Neuroscience Information Framework)</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options"><item key="allowedSpecies"><item>mouse</item></item></item><item key="popularity">3.0</item><item key="description">"   	
Welcome to the International Mouse Strain Resource (IMSR)

The IMSR is a searchable online database of mouse strains and stocks available worldwide, including inbred, mutant, and genetically engineered mice. The goal of the IMSR is to assist the international scientific community in locating and obtaining mouse resources for research. Note that the data content found in the IMSR is as it was supplied by data provider sites. "</item><item key="tags"><item>findmice</item><item>mouse</item></item><item key="url">http://www.findmice.org/fetch?page=imsrSummary&amp;query={{Symbol}}</item><item key="lastmodified">2011-05-03 22:47:33</item><item key="usage_data"><item key="layouts">3.0</item><item key="users">2</item></item><item key="created">2010-09-21 00:25:43</item><item key="id">808</item><item key="shortUrl">www.findmice.org</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">"        Welcome to the International Mouse Strain Resource (IMSR)  The IMSR is a searchable online database of mouse strains and stocks...</item><item key="in">plugin</item><item key="owner"><item key="username">tsaunders</item><item key="url">/profile/3065/tsaunders</item><item key="name">Thom Saunders</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>mouse</item></item><item key="name">International Mouse Strain Resource</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="description"/><item key="created">2012-12-07 01:42:01</item><item key="url">http://www.sciencedirect.com/</item><item key="lastmodified">2012-12-07 01:42:01</item><item key="usage_data"><item key="layouts">3.0</item><item key="users">2</item></item><item key="popularity">3.0</item><item key="id">1066</item><item key="shortUrl">www.sciencedirect.com</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">No summary provided.</item><item key="in">plugin</item><item key="owner"><item key="username">shuichi</item><item key="url">/profile/5765/shuichi</item><item key="name">shuichi</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item><item>mouse</item><item>rat</item><item>fruitfly</item><item>nematode</item><item>zebrafish</item><item>thale-cress</item><item>frog</item><item>pig</item></item><item key="name">Science Direct</item></item><item><item key="rating_data"><item key="avg_stars">10</item><item key="total">2</item><item key="avg">5</item></item><item key="options"><item key="certified_owner">True</item></item><item key="popularity">3.0</item><item key="description">The Drug-Gene Interaction database (DGIdb) mines existing resources that generate hypotheses about how mutated genes might be targeted therapeutically or prioritized for drug development. It provides an interface for searching lists of genes against a compendium of drug-gene interactions and potentially 'druggable' genes. DGIdb can be accessed at http://dgidb.org/.</item><item key="tags"><item>database</item><item>drug</item><item>druggable-genome</item><item>gene</item><item>interaction</item></item><item key="url">http://dgidb.genome.wustl.edu/genes/{{Symbol}}</item><item key="lastmodified">2013-12-07 19:55:13</item><item key="usage_data"><item key="layouts">3.0</item><item key="users">3</item></item><item key="created">2013-10-10 21:40:20</item><item key="id">1136</item><item key="shortUrl">dgidb.genome.wustl.edu</item><item key="role_permission"><item>biogpsusers</item></item><item key="short_description">DGIdb is a database and web interface for identifying known and potential drug-gene relationships</item><item key="in">plugin</item><item key="owner"><item key="username">obigriffith</item><item key="url">/profile/7396/obigriffith</item><item key="name">Obi Griffith</item></item><item key="permission_style">public</item><item key="type">iframe</item><item key="species"><item>human</item></item><item key="name">DGIdb - The Drug Gene Interaction Database</item></item><item><item key="rating_data"><item key="avg_stars">0</item><item key="total">0</item><item key="avg">0</item></item><item key="options">None</item><item key="popularity">3.0</item><item key="description">http://www.humanproteomemap.org/index.php

http://www.nature.com/nature/journal/v509/n7502/full/nature13302.html

The Human Proteome Map (HPM) portal is an interactive resource to the scientific community by integrating the massive peptide sequencing result from the draft map of the human proteome project. The project was based on LC-MS/MS by utilizing of high resolution and high accuracy Fourier transform mass spectrometry. All mass spectrometry data including precursors and HCD-derived fragments were acquired on the Orbitrap mass analyzers in the high-high mode. Currently, the HPM contains direct evidence of translation of a number of protein products derived from over 17,000 human genes covering &gt;84% of the annotated protein-coding genes in humans based on &gt;290,000 non-redundant peptide identifications of multiple organs/tissues and cell types from individuals with clinically defined healthy tissues. This includes 17 adult tissues, 6 primary hematopoietic cells and 7 fetal tissues. The HPM portal provides an interactive web resource by reorganizing the label-free quantitative proteomic data set in a simple graphical view. In addition, the portal provides selected reaction monitoring (SRM) information for all peptides identified.

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