<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item><item key="slug">transcriptional-profiling-of-ex-vivo-isolated-mous</item><item key="factor_count">2</item><item key="sample_count">8</item><item key="tags"><item>cell</item><item>colon</item><item>intestine</item><item>lymphatic vessel</item><item>muscle</item><item>muscle cell</item><item>smooth muscle cell</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-22034</item><item key="id">6100</item><item key="name">Transcriptional profiling of ex vivo isolated mouse blood vascular and lymphatic endothelial cells</item></item><item><item key="slug">gene-expression-profiling-of-small-intestinal-epit</item><item key="factor_count">1</item><item key="sample_count">4</item><item key="tags"><item>clathrin</item><item>intestine</item><item>small intestine</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-22020</item><item key="id">6099</item><item key="name">Gene expression profiling of small intestinal epithelia in AP-1B KO mice</item></item><item><item key="slug">gene-expression-on-cd11b-iga-and-cd11b-iga-cells-i</item><item key="factor_count">1</item><item key="sample_count">4</item><item key="tags"><item>cell</item><item>intestine</item><item>small intestine</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-37225</item><item key="id">6849</item><item key="name">Gene expression on CD11b+ IgA and CD11b- IgA cells in the small intestine #01</item></item><item><item key="slug">gene-expression-profiles-of-colon-from-hif-2ff-hif</item><item key="factor_count">1</item><item key="sample_count">2</item><item key="tags"><item>colitis</item><item>colon</item><item>disease</item><item>dss</item><item>ibd</item><item>inflammatory bowel disease</item><item>intestinal epithelium</item><item>intestine</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-43416</item><item key="id">7131</item><item key="name">Gene Expression profiles of colon from Hif-2&#945;F/F, Hif-2&#945;l&#916;IE treated with DSS</item></item><item><item key="slug">gene-expression-profiles-of-colon-from-vhlff-vhlie</item><item key="factor_count">1</item><item key="sample_count">4</item><item key="tags"><item>adenomas</item><item>cancer</item><item>cell</item><item>colon</item><item>colon cancer</item><item>intestinal epithelium</item><item>intestine</item><item>protein</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-36091</item><item key="id">6799</item><item key="name">Gene Expression profiles of colon from VhlF/F, Vhl&#916;IE, VhlF/F/Apcmin/+, Vhl&#916;IE/Apcmin/+</item></item><item><item key="slug">expression-profiling-identifies-novel-gene-targets</item><item key="factor_count">1</item><item key="sample_count">8</item><item key="tags"><item>genome</item><item>intestinal epithelium</item><item>intestine</item><item>pancreas</item><item>proximal</item><item>small intestine</item><item>villin</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-29048</item><item key="id">6459</item><item key="name">Expression Profiling Identifies Novel Gene Targets and Functions for Pdx1 in the Duodenum of Mature Mice</item></item><item><item key="slug">transcription-profiling-of-mouse-conditional-intes</item><item key="factor_count">0</item><item key="sample_count">6</item><item key="tags"><item>cancer</item><item>cell</item><item>colon</item><item>endoderm</item><item>hepatocyte</item><item>intestine</item><item>liver</item><item>mucosa</item><item>villin</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-11759</item><item key="id">5416</item><item key="name">Transcription profiling of mouse conditional intestinal epithelial Hnf4I? knockout to investigate the role of HNF4alpha in the adult colon</item></item><item><item key="slug">transcription-profiling-of-mouse-cystic-fibrosis-m</item><item key="factor_count">0</item><item key="sample_count">10</item><item key="tags"><item>axis</item><item>body</item><item>cell</item><item>cystic fibrosis</item><item>disease</item><item>goblet cell</item><item>ileum</item><item>intestinal disease</item><item>intestine</item><item>lipid</item><item>mast cell</item><item>submucosa</item><item>villus</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-5715</item><item key="id">7633</item><item key="name">Transcription profiling of mouse cystic fibrosis model Cftr knockouts ileum were analysed to investigate intestinal phenotypes</item></item><item><item key="slug">transcription-profiling-of-mouse-epithelium-and-me</item><item key="factor_count">1</item><item key="sample_count">6</item><item key="tags"><item>epithelial phenotype</item><item>genome</item><item>intestinal epithelium</item><item>intestine</item><item>small intestine</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-6383</item><item key="id">7739</item><item key="name">Transcription profiling of mouse epithelium and mesenchyme to study the gene expression profiles in these two compartments</item></item><item><item key="slug">transcription-profiling-of-mouse-hypomorphic-for-a</item><item key="factor_count">0</item><item key="sample_count">4</item><item key="tags"><item>cell</item><item>crohn's disease</item><item>disease</item><item>epithelial cell</item><item>ileal epithelium</item><item>intestinal epithelium</item><item>intestine</item><item>lipid</item><item>paneth cell</item><item>peroxisome</item><item>protein</item><item>small intestine</item><item>specialized epithelial cell</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-13512</item><item key="id">5547</item><item key="name">Transcription profiling of mouse hypomorphic for ATG16L1 (implicated in Crohns disease) protein expression reveals a key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells</item></item></data></biogps>
