<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item><item key="slug">transcription-profiling-of-rat-esophageal-tissues</item><item key="factor_count">0</item><item key="sample_count">2</item><item key="tags"><item>adenocarcinoma</item><item>cancer</item><item>histone</item></item><item key="species">rat</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-9976</item><item key="id">9413</item><item key="name">Transcription profiling of rat  esophageal tissues AND esophageal adenocarcinoma cells treated WITH  phenylbutyrate-derived histone deacetylase inhibitor (OSU-HDAC42) OR  vehicle TO assess target effect IN an IN vivo MODEL utilized FOR EAC  development</item></item><item><item key="slug">comparison-of-gene-expression-pattern-between-wild</item><item key="factor_count">1</item><item key="sample_count">6</item><item key="tags"><item>endoderm</item><item>genome</item><item>histone</item><item>primitive endoderm</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-54931</item><item key="id">7566</item><item key="name">Comparison of gene expression pattern between Wild-type and Setd2 knockout mESCs [Affymetrix]</item></item><item><item key="slug">differentiating-3t3-l1-adipocytes-introduced-with</item><item key="factor_count">0</item><item key="sample_count">4</item><item key="tags"><item>adenine</item><item>central</item><item>histone</item><item>protein</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-18598</item><item key="id">5862</item><item key="name">Differentiating 3T3-L1 adipocytes, introduced with siRNA against aof2 and rfk genes, or treated with tranylcypromine</item></item><item><item key="slug">differentiating-3t3-l1-adipocytes-introduced-wit-2</item><item key="factor_count">0</item><item key="sample_count">2</item><item key="tags"><item>central</item><item>histone</item><item>protein</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-18599</item><item key="id">5863</item><item key="name">Differentiating 3T3-L1 adipocytes, introduced with siRNA against phf21a gene</item></item><item><item key="slug">differentiation-of-mammary-tumors-by-ski-606-bostu</item><item key="factor_count">0</item><item key="sample_count">8</item><item key="tags"><item>blood vessel</item><item>breast</item><item>breast cancer</item><item>cancer</item><item>cell</item><item>epidermal cell</item><item>histone</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-22150</item><item key="id">6116</item><item key="name">Differentiation of Mammary Tumors by SKI-606 (bostutinib) (gene expression)</item></item><item><item key="slug">different-levels-of-canonical-wnt-signaling-exert</item><item key="factor_count">2</item><item key="sample_count">4</item><item key="tags"><item>axis</item><item>cell</item><item>colon</item><item>compartment</item><item>histone</item><item>histone h2b</item><item>notch</item><item>protein</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-41688</item><item key="id">7048</item><item key="name">Different levels of canonical Wnt signaling exert distinct roles in the colonic epithelium</item></item><item><item key="slug">distinct-and-overlapping-gene-regulatory-networks</item><item key="factor_count">2</item><item key="sample_count">18</item><item key="tags"><item>bone</item><item>cell</item><item>central</item><item>histone</item><item>nervous system</item><item>protein</item><item>striatum</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-31792</item><item key="id">6610</item><item key="name">Distinct and Overlapping Gene Regulatory Networks in BMP- and HDAC-Controlled Cell Fate Determination in the Embryonic Forebrain</item></item><item><item key="slug">dna-methylation-profiling-of-embryonic-stem-cell-d</item><item key="factor_count">1</item><item key="sample_count">7</item><item key="tags"><item>brain</item><item>cell</item><item>chromatin</item><item>ectoderm</item><item>endoderm</item><item>histone</item><item>histone h3</item><item>liver</item><item>lysine</item><item>mesoderm</item><item>muscle</item><item>proximal</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-32081</item><item key="id">6626</item><item key="name">DNA methylation profiling of embryonic stem cell differentiation into the three germ layers [Expression analysis]</item></item><item><item key="slug">effect-on-gene-expression-upon-deletion-of-ada3</item><item key="factor_count">1</item><item key="sample_count">4</item><item key="tags"><item>histone</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-37542</item><item key="id">6862</item><item key="name">Effect on gene expression upon deletion of Ada3</item></item><item><item key="slug">epigenetic-regulation-of-type-1-diabetes-in-nonobe</item><item key="factor_count">0</item><item key="sample_count">6</item><item key="tags"><item>body</item><item>chromatin</item><item>disease</item><item>genome</item><item>glucose</item><item>histone</item><item>insulin</item><item>left</item><item>pancreas</item><item>protein</item><item>scid</item><item>spleen</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-26461</item><item key="id">6317</item><item key="name">Epigenetic regulation of type 1 diabetes in nonobese diabetic mice</item></item></data></biogps>
