<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item><item key="slug">utx-regulated-genes-in-mouse-embryonic-stem-cells</item><item key="factor_count">1</item><item key="sample_count">4</item><item key="tags"><item>cell</item><item>chromosome</item><item>dish</item><item>embryonic stem cell</item><item>genome</item><item>histone</item><item>histone h3</item><item>lysine</item><item>stem cell</item><item>x chromosome</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-35415</item><item key="id">6768</item><item key="name">UTX regulated genes in mouse embryonic stem cells</item></item><item><item key="slug">widespread-targeted-chromatin-remodeling-during-th</item><item key="factor_count">4</item><item key="sample_count">10</item><item key="tags"><item>cell</item><item>chromatin</item><item>genome</item><item>histone</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-26096</item><item key="id">6305</item><item key="name">Widespread targeted chromatin remodeling during the initial phase of somatic cell reprogramming [expression]</item></item><item><item key="slug">zebularine-effect-on-mouse-embryonic-stem-cells-ma</item><item key="factor_count">1</item><item key="sample_count">18</item><item key="tags"><item>cell</item><item>cytosine</item><item>histone</item><item>stem cell</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-29072</item><item key="id">6460</item><item key="name">Zebularine effect on mouse embryonic stem cells manifested as cardiod-myogenic potential: testable hypothesis generation using microarray data</item></item><item><item key="slug">gene-expression-profiles-of-hodgkins-lymphoma-cell</item><item key="factor_count">1</item><item key="sample_count">2</item><item key="tags"><item>cell</item><item>histone</item><item>hodgkin's lymphoma</item><item>line</item><item>lymphoma</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-30884</item><item key="id">1267</item><item key="name">Gene expression profiles of Hodgkin&#8217;s lymphoma cells after treatment with vorinostat</item></item><item><item key="slug">genomics-of-oral-cancer-cells</item><item key="factor_count">1</item><item key="sample_count">11</item><item key="tags"><item>cancer</item><item>carcinoma</item><item>cell</item><item>genome</item><item>histone</item><item>histone h2a</item><item>histone h2b</item><item>keratin</item><item>line</item><item>protein</item><item>serum</item><item>squamous</item><item>squamous carcinoma</item><item>tongue</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-15308</item><item key="id">1276</item><item key="name">Genomics of oral cancer cells</item></item><item><item key="slug">histone-acetylation-and-dna-demethylation-of-t-cel</item><item key="factor_count">3</item><item key="sample_count">16</item><item key="tags"><item>anaplastic large cell lymphoma</item><item>cell</item><item>cell phenotype</item><item>histone</item><item>hodgkin lymphoma</item><item>leukemia</item><item>lymphoma</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-26101</item><item key="id">1241</item><item key="name">Histone acetylation and DNA demethylation of T-cells result in an anaplastic large cell lymphoma-like phenotype.</item></item><item><item key="slug">primary-human-erythroid-progenitor-cells-nk57-trea</item><item key="factor_count">1</item><item key="sample_count">9</item><item key="tags"><item>cell</item><item>class</item><item>disease</item><item>hemoglobin</item><item>histone</item><item>left</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-22368</item><item key="id">1347</item><item key="name">Primary human erythroid progenitor cells NK57 treatment samples</item></item><item><item key="slug">rhabdoid-tumor-gene-expression-clues-to-pathogenes</item><item key="factor_count">0</item><item key="sample_count">53</item><item key="tags"><item>cell</item><item>chromatin</item><item>clear cell</item><item>crest</item><item>eye</item><item>histone</item><item>kidney</item><item>nestin</item><item>neural crest</item><item>protein</item><item>rts</item><item>stem cell</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-11482</item><item key="id">1375</item><item key="name">Rhabdoid Tumor: Gene Expression Clues to Pathogenesis and Potential Therapeutic Targets</item></item><item><item key="slug">transcription-profiling-by-array-of-myod-myf-mouse</item><item key="factor_count">3</item><item key="sample_count">36</item><item key="tags"><item>genome</item><item>histone</item><item>muscle</item></item><item key="species">mouse</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-3858</item><item key="id">8630</item><item key="name">Transcription profiling by array of Myod-/-Myf-- mouse embryonic fibroblasts transduced for either MDER or MDER+Myog</item></item><item><item key="slug">classical-hodgkin-lymphoma-shows-epigenetic-feat-2</item><item key="factor_count">2</item><item key="sample_count">22</item><item key="tags"><item>b-cell lymphoma</item><item>burkitt lymphoma</item><item>cell</item><item>chromatin</item><item>diffuse large b-cell lymphoma</item><item>histone</item><item>histone h3</item><item>hodgkin lymphoma</item><item>lymphoma</item><item>myeloma</item><item>plasma cell</item><item>plasma cell myeloma</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-21252</item><item key="id">1301</item><item key="name">Classical Hodgkin lymphoma shows epigenetic features of an abortive plasma cellular differentiation: expression of A/T-treated vs. untreated B-cell lines</item></item></data></biogps>
