<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item><item key="slug">networking-of-differentially-expressed-genes-in-5</item><item key="name">Networking of differentially expressed genes in human Saos-2 osteosarcoma cells resistant to methotrexate</item><item key="sample_count">6</item><item key="tags"><item>breast</item><item>breast cancer</item><item>cancer</item><item>cell</item><item>colon</item><item>colon cancer</item><item>external</item><item>genome</item><item>leukemia</item><item>line</item><item>osteosarcoma</item><item>pancreatic cancer</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-16089</item><item key="id">3277</item><item key="factor_count">1</item></item><item><item key="slug">sirna-profiling-of-stable-hct116-sitop1-and-mcf-7</item><item key="name">siRNA profiling of stable HCT116-siTop1 and MCF-7-siTop1 cell lines reveal non-classical functions of human Topoisomerase I:</item><item key="sample_count">12</item><item key="tags"><item>breast</item><item>cell</item><item>colon</item><item>genome</item><item>histone</item><item>hypersensitivity</item><item>volume</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-7161</item><item key="id">4885</item><item key="factor_count">0</item></item><item><item key="slug">tcf4-and-cdx2-major-transcription-factors-for-inte</item><item key="name">TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions</item><item key="sample_count">5</item><item key="tags"><item>cancer</item><item>cell</item><item>chromatin</item><item>colon</item><item>colon cancer</item><item>colorectal cancer</item><item>genome</item><item>intestinal epithelium</item><item>intestine</item><item>line</item><item>nucleotide</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-22572</item><item key="id">3720</item><item key="factor_count">1</item></item><item><item key="slug">transcriptional-pathway-signatures-for-the-aurora</item><item key="name">Transcriptional pathway signatures for the Aurora inhibitor Danusertib</item><item key="sample_count">20</item><item key="tags"><item>breast</item><item>carcinoma</item><item>cell</item><item>colon</item><item>colon carcinoma</item><item>left</item><item>line</item><item>ovary</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-24547</item><item key="id">3827</item><item key="factor_count">4</item></item><item><item key="slug">transcription-profiling-by-array-of-formalin-fixed</item><item key="name">Transcription profiling by array of formalin-fixed paraffin-embedded or fresh frozen human tumor samples</item><item key="sample_count">16</item><item key="tags"><item>colon</item><item>kidney</item><item>lung</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-19249</item><item key="id">3506</item><item key="factor_count">3</item></item><item><item key="slug">transcription-profiling-by-array-of-healthy-human</item><item key="name">Transcription profiling by array of healthy human colorectal mucosa</item><item key="sample_count">19</item><item key="tags"><item>cecum</item><item>colon</item><item>mucosa</item><item>rectum</item><item>transverse</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-9254</item><item key="id">5024</item><item key="factor_count">1</item></item><item><item key="slug">transcription-profiling-by-array-of-human-cancer-2</item><item key="name">Transcription profiling by array of human cancer cell lines resistant to methotrexate</item><item key="sample_count">42</item><item key="tags"><item>breast</item><item>breast cancer</item><item>cadherin</item><item>cancer</item><item>colon</item><item>colon cancer</item><item>e-cadherin</item><item>leukemia</item><item>osteosarcoma</item><item>pancreatic cancer</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-16648</item><item key="id">3320</item><item key="factor_count">3</item></item><item><item key="slug">transcription-profiling-by-array-of-human-colon-ca</item><item key="name">Transcription profiling by array of human colon cancer cells after treatment with docosahexaenoic acid</item><item key="sample_count">22</item><item key="tags"><item>cancer</item><item>cell</item><item>colon</item><item>colon cancer</item><item>line</item><item>volume</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-MEXP-2010</item><item key="id">5129</item><item key="factor_count">3</item></item><item><item key="slug">genome-wide-expression-data-from-discordant-twins</item><item key="name">Genome wide expression data from discordant twins (ulcerative colitis, primary mucosal tissue)</item><item key="sample_count">16</item><item key="tags"><item>colitis</item><item>colon</item><item>disease</item><item>gut</item><item>sigmoid colon</item><item>ulcerative colitis</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-22619</item><item key="id">3726</item><item key="factor_count">2</item></item><item><item key="slug">genome-wide-gene-expression-analysis-of-mucosal-co</item><item key="name">Genome-wide gene expression analysis of mucosal colonic biopsies and isolated colonocytes...</item><item key="sample_count">56</item><item key="tags"><item>cell</item><item>colitis</item><item>colon</item><item>descending colon</item><item>genome</item><item>irritable bowel syndrome</item><item>lamina propria</item><item>syndrome</item><item>ulcerative colitis</item></item><item key="species">human</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-13367</item><item key="id">3070</item><item key="factor_count">0</item></item></data></biogps>
