<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item><item key="slug">genome-wide-profiling-of-p53-response-to-different</item><item key="name">Genome Wide Profiling of p53 Response to Differentiation or DNA Damage of Human Embryonic Stem Cells</item><item key="sample_count">9</item><item key="tags"><item>cell</item><item>chromatin</item><item>genome</item></item><item key="id">2253</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-39762</item><item key="species">human</item><item key="factor_count">1</item></item><item><item key="slug">global-analysis-of-nfatc1-targets-in-human-vascula</item><item key="name">Global analysis of NFATc1 targets in human vascular endothelial cells</item><item key="sample_count">5</item><item key="tags"><item>chromatin</item><item>genome</item><item>histone</item><item>umbilical vein</item><item>vein</item></item><item key="id">2300</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-49426</item><item key="species">human</item><item key="factor_count">2</item></item><item><item key="slug">global-expression-analysis-of-dlbcl-and-smzl-cell</item><item key="name">Global expression analysis of DLBCL and SMZL cell lines</item><item key="sample_count">46</item><item key="tags"><item>b-cell lymphoma</item><item>cell</item><item>chromatin</item><item>diffuse large b-cell lymphoma</item><item>genome</item><item>lipopolysaccharide</item><item>lymphoma</item><item>marginal zone lymphoma</item><item>protein</item><item>splenic marginal zone lymphoma</item></item><item key="id">2688</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-42203</item><item key="species">human</item><item key="factor_count">3</item></item><item><item key="slug">global-expression-analysis-of-dlbcl-cell-lines-wit</item><item key="name">Global expression analysis of DLBCL cell lines with LITAF over-expression or silencing</item><item key="sample_count">20</item><item key="tags"><item>b-cell lymphoma</item><item>cell</item><item>chromatin</item><item>diffuse large b-cell lymphoma</item><item>lipopolysaccharide</item><item>lymphoma</item><item>protein</item></item><item key="id">2689</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-42174</item><item key="species">human</item><item key="factor_count">3</item></item><item><item key="slug">global-expression-analysis-of-hnf4alpha-and-hnfgam</item><item key="name">Global expression analysis of HNF4alpha and HNFgamma-mediated transcriptional control</item><item key="sample_count">9</item><item key="tags"><item>cell</item><item>chromatin</item><item>genome</item><item>hepatocyte</item><item>histone</item><item>lipid</item><item>liver</item><item>nucleosome</item><item>protein</item></item><item key="id">3490</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-18973</item><item key="species">human</item><item key="factor_count">0</item></item><item><item key="slug">histone-deacetylase-inhibition-decreases-prolifera</item><item key="name">Histone deacetylase inhibition decreases proliferation and potentiates the effect of ionizing radiation in atypical teratoid/rhabdoid tumor cells</item><item key="sample_count">4</item><item key="tags"><item>chromatin</item><item>cns neoplasm</item><item>histone</item><item>protein</item></item><item key="id">4187</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-31122</item><item key="species">human</item><item key="factor_count">1</item></item><item><item key="slug">phd-finger-recognition-of-unmodified-histone-h3r2</item><item key="name">PHD finger recognition of unmodified histone H3R2 links UHRF1 to regulation of euchromatic gene expression</item><item key="sample_count">3</item><item key="tags"><item>arginine</item><item>chromatin</item><item>histone</item><item>histone h3</item><item>lysine</item><item>protein</item></item><item key="id">4157</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-30478</item><item key="species">human</item><item key="factor_count">1</item></item><item><item key="slug">proteomic-analysis-of-native-hepatocyte-nuclear-fa</item><item key="name">Proteomic analysis of native hepatocyte nuclear factor-4{alpha} (HNF4{alpha}) isoforms, phosphorylation status, and interactive cofactors.</item><item key="sample_count">9</item><item key="tags"><item>cell</item><item>chromatin</item><item>genome</item><item>hepatocyte</item><item>histone</item><item>lipid</item><item>liver</item><item>nucleosome</item><item>protein</item></item><item key="id">3491</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-18990</item><item key="species">human</item><item key="factor_count">1</item></item><item><item key="slug">shrna-knockdown-of-the-transcription-factor-nf-ya</item><item key="name">shRNA knockdown of the transcription factor NF-YA (NFYA)</item><item key="sample_count">6</item><item key="tags"><item>cancer</item><item>cell</item><item>chromatin</item><item>genome</item><item>histone</item><item>proximal</item></item><item key="id">2620</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-40215</item><item key="species">human</item><item key="factor_count">2</item></item><item><item key="slug">shrna-profiling-of-human-dznep-treated-glioblastom</item><item key="name">shRNA profiling of human DZNep-treated glioblastoma multiforme cancer stem cells</item><item key="sample_count">6</item><item key="tags"><item>breast</item><item>breast cancer</item><item>cancer</item><item>cell</item><item>chromatin</item><item>gbm</item><item>genome</item><item>prostate</item><item>prostate cancer</item><item>protein</item><item>stem cell</item></item><item key="id">3417</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-18150</item><item key="species">human</item><item key="factor_count">0</item></item></data></biogps>
