<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item><item key="slug">ras-signaling-in-colon-carcinoma-target-gene-dereg</item><item key="name">RAS signaling in colon carcinoma: Target gene deregulation and growth control through Y-box-binding protein 1</item><item key="sample_count">18</item><item key="tags"><item>cancer</item><item>cell</item><item>chromatin</item><item>colorectal cancer</item><item>line</item></item><item key="id">1335</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-18232</item><item key="species">human</item><item key="factor_count">2</item></item><item><item key="slug">rhabdoid-tumor-gene-expression-clues-to-pathogenes</item><item key="name">Rhabdoid Tumor: Gene Expression Clues to Pathogenesis and Potential Therapeutic Targets</item><item key="sample_count">53</item><item key="tags"><item>cell</item><item>chromatin</item><item>clear cell</item><item>crest</item><item>eye</item><item>histone</item><item>kidney</item><item>nestin</item><item>neural crest</item><item>protein</item><item>rts</item><item>stem cell</item></item><item key="id">1375</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-11482</item><item key="species">human</item><item key="factor_count">0</item></item><item><item key="slug">the-swisnf-tumor-suppressor-complex-establishes-nu</item><item key="name">The Swi/Snf tumor suppressor complex establishes nucleosome occupancy at target promoters [expression]</item><item key="sample_count">10</item><item key="tags"><item>cell</item><item>chromatin</item><item>genome</item><item>nucleosome</item></item><item key="id">8703</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-46645</item><item key="species">mouse</item><item key="factor_count">1</item></item><item><item key="slug">transcription-profiling-of-mouse-aged-hematopoieti</item><item key="name">Transcription profiling of mouse aged hematopoietic stem cells, p53 mutants</item><item key="sample_count">14</item><item key="tags"><item>bone</item><item>bone marrow</item><item>cell</item><item>chromatin</item><item>protein</item><item>stem cell</item></item><item key="id">8790</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-6503</item><item key="species">mouse</item><item key="factor_count">0</item></item><item><item key="slug">transcription-profiling-of-mouse-bone-marrow-with</item><item key="name">Transcription profiling of mouse bone marrow with Aiolos and OBF-1 deletions from 7 week old mice</item><item key="sample_count">8</item><item key="tags"><item>cell</item><item>chromatin</item><item>compartment</item><item>immunoglobulin</item></item><item key="id">8366</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-12356</item><item key="species">mouse</item><item key="factor_count">0</item></item><item><item key="slug">transcription-profiling-of-mouse-megakaryocyte-dif</item><item key="name">Transcription profiling of mouse megakaryocyte differentiation</item><item key="sample_count">9</item><item key="tags"><item>bone</item><item>bone marrow</item><item>cell</item><item>chromatin</item><item>cytoskeleton</item><item>intermediate</item><item>liver</item><item>liver cell</item><item>megakaryocyte</item><item>membrane</item><item>platelet</item><item>protein</item><item>surface</item><item>tubulin</item></item><item key="id">8794</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-6593</item><item key="species">mouse</item><item key="factor_count">1</item></item><item><item key="slug">classical-hodgkin-lymphoma-shows-epigenetic-feat-2</item><item key="name">Classical Hodgkin lymphoma shows epigenetic features of an abortive plasma cellular differentiation: expression of A/T-treated vs. untreated B-cell lines</item><item key="sample_count">22</item><item key="tags"><item>b-cell lymphoma</item><item>burkitt lymphoma</item><item>cell</item><item>chromatin</item><item>diffuse large b-cell lymphoma</item><item>histone</item><item>histone h3</item><item>hodgkin lymphoma</item><item>lymphoma</item><item>myeloma</item><item>plasma cell</item><item>plasma cell myeloma</item></item><item key="id">1301</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-21252</item><item key="species">human</item><item key="factor_count">2</item></item><item><item key="slug">classical-hodgkin-lymphoma-shows-epigenetic-feat-3</item><item key="name">Classical Hodgkin lymphoma shows epigenetic features of an abortive plasma cellular differentiation: expression of Hodgkin vs. B-cell lines</item><item key="sample_count">12</item><item key="tags"><item>b-cell lymphoma</item><item>cell</item><item>chromatin</item><item>histone</item><item>histone h3</item><item>hodgkin lymphoma</item><item>line</item><item>lymphoma</item><item>myeloma</item><item>plasma cell</item><item>plasma cell myeloma</item></item><item key="id">1302</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-21251</item><item key="species">human</item><item key="factor_count">2</item></item><item><item key="slug">transcription-profiling-of-human-caco-2-intestinal</item><item key="name">Transcription profiling of human Caco-2 intestinal epithelial cell line infected with wild type Shigella flexneri and a OspF mutantt reveals an injected bacterial effector targets chromatin access for NF-kB as a strategy to shape transcription of immune genes</item><item key="sample_count">8</item><item key="tags"><item>cell</item><item>chromatin</item><item>histone</item><item>histone h3</item><item>protein</item><item>serine</item></item><item key="id">1605</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-6082</item><item key="species">human</item><item key="factor_count">0</item></item><item><item key="slug">transcription-profiling-of-human-mcf-7-cells-with</item><item key="name">Transcription profiling of human MCF-7 cells with inducible LMO4 and DN-Clim expression</item><item key="sample_count">6</item><item key="tags"><item>breast</item><item>breast cancer</item><item>cancer</item><item>cell</item><item>chromatin</item><item>epithelial cell</item><item>estrogen</item><item>protein</item></item><item key="id">9879</item><item key="is_default">False</item><item key="geo_gse_id">E-GEOD-7382</item><item key="species">human</item><item key="factor_count">0</item></item></data></biogps>
