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Home › Dataset Library › Transcription profiling of mouse liver and spleen from strains that are susceptible and tolerant to trypanosome infection

Dataset: Transcription profiling of mouse liver and spleen from strains that are susceptible and tolerant to trypanosome infection

Tissues were harvested from mice from two congenic strains (Tir1CC and Tir3CC) and their two control strains (Tir1AA and Tir3AA). The...

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Tissues were harvested from mice from two congenic strains (Tir1CC and Tir3CC) and their two control strains (Tir1AA and Tir3AA). The congenic strains were bred from inbred lines known to be susceptible (A/J) and tolerant (C57BL/6) to Trypanosome infection, such that C57BL/6 genomic regions underlying QTL for trypanotolerance were present in an A/J genetic background. Liver and spleen tissues were harvested. For each strain RNA was prepared from various tissues of twenty mice. For each condition, RNA extracts from individuals were pooled (5 per pool) prior to hybridisation.

Species:
mouse

Samples:
23

Source:
E-TABM-865

Updated:
Dec.12, 2014

Registered:
Nov.21, 2014


Factors: (via ArrayExpress)
Sample StrainOrLine OrganismPart
L_T1A_0_1 Tir1AA liver
L_T1A_0_1 Tir1AA liver
L_T1A_0_1 Tir1AA liver
L_T1A_0_1 Tir1AA liver
L_T1C_0_3 A.B6-Tir1 liver
L_T1C_0_3 A.B6-Tir1 liver
L_T1C_0_3 A.B6-Tir1 liver
L_T1C_0_3 A.B6-Tir1 liver
L_T3A_0_1 Tir3AA liver
L_T3A_0_1 Tir3AA liver
L_T3A_0_1 Tir3AA liver
L_T3C_0_1 A.B6-Tir3 liver
L_T3C_0_1 A.B6-Tir3 liver
L_T3C_0_1 A.B6-Tir3 liver
L_T3C_0_1 A.B6-Tir3 liver
S_T1A_0_1 Tir1AA spleen
S_T1A_0_1 Tir1AA spleen
S_T1A_0_1 Tir1AA spleen
S_T1A_0_1 Tir1AA spleen
S_T1C_0_1 A.B6-Tir1 spleen
S_T1C_0_1 A.B6-Tir1 spleen
S_T1C_0_1 A.B6-Tir1 spleen
S_T1C_0_1 A.B6-Tir1 spleen

Tags

  • liver
  • spleen

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