{"owner": "ArrayExpress Uploader", "pop_total": 0, "id": 1853, "factors": [{"T-ALL-7": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 14", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"MLL-2": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "MLL", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 86", "CLINICAL HISTORY": "prognostic subgroup: MLL"}}, {"T-ALL-9": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 21", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"Hyperdip50-10": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 59", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"T-ALL-22": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 94", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-24": {"STRAIN": "ALL-SIL", 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PART": "bone marrow", "INDIVIDUAL": "patient 11", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"Hyperdip50-12": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 65", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"T-ALL-11": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 24", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-26": {"STRAIN": "DU528", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"Hyperdip50-14": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 73", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"T-ALL-19": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 26", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"Hyperdip50-17": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 76", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"Hyperdip50-7": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 48", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"T-ALL-30": {"STRAIN": "PER-117", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-35": {"STRAIN": "PER-550", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"MLL-4": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "MLL", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 90", "CLINICAL HISTORY": "prognostic subgroup: MLL"}}, {"Hyperdip50-5": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 43", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"MLL-5": {"STRAIN": "PER-377", "CHROMOSOMAL ABNORMALITY": "MLL", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: MLL"}}, {"T-ALL-29": {"STRAIN": "MOLT4", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"Hyperdip50-8": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 50", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"Hyperdip50-16": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 75", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"T-ALL-5": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 10", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"MLL-7": {"STRAIN": "PER-490", "CHROMOSOMAL ABNORMALITY": "MLL", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: MLL"}}, {"Hyperdip50-3": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 20", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"T-ALL-10": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 23", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-15": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 41", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-25": {"STRAIN": "CEM-CCRF", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-23": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "peripheral blood", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-18": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "peripheral blood", "INDIVIDUAL": "patient 24", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-19": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 26", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"MLL-1": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "MLL", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 9", "CLINICAL HISTORY": "prognostic subgroup: MLL"}}, {"BCR-ABL-3": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "BCR-ABL", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 25", "CLINICAL HISTORY": "prognostic subgroup: BCR-ABL"}}, {"T-ALL-34": {"STRAIN": "PER-537", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"Hyperdip50-6": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 45", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}, {"T-ALL-28": {"STRAIN": "Jurkat", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"T-ALL-3": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 4", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"MLL-6": {"STRAIN": "PER-485", "CHROMOSOMAL ABNORMALITY": "MLL", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: MLL"}}, {"T-ALL-27": {"STRAIN": "HSB2", "CHROMOSOMAL ABNORMALITY": "  ", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: T-ALL"}}, {"E2A-PBX1-3": {"STRAIN": "PER-371", "CHROMOSOMAL ABNORMALITY": "E2A-PBX1", "ORGANISM PART": "  ", "INDIVIDUAL": "  ", "CLINICAL HISTORY": "prognostic subgroup: E2A-PBX1"}}, {"Hyperdip50-9": {"STRAIN": "  ", "CHROMOSOMAL ABNORMALITY": "Hyperdip50", "ORGANISM PART": "bone marrow", "INDIVIDUAL": "patient 56", "CLINICAL HISTORY": "prognostic subgroup: Hyperdip50"}}], "ownerprofile_id": "arrayexpress_sid", "platform": 3, "summary_wrapped": "We examined published microarray data from 104 acute lymphoblastic leukaemia patient specimens, that represent six different subgroups...", "pubmed_id": 17002788, "geo_gse_id": "E-TABM-125", "owner_profile": "/profile/8773/arrayexpressuploader", "factor_count": 5, "sample_count": 68, "tags": ["tree"], "lastmodified": "Dec.12, 2014", "is_default": false, "geo_gds_id": "", "slug": "transcription-profiling-by-array-of-bone-marrow-an", "geo_id_plat": "E-TABM-125_A-AFFY-33", "name": "Transcription profiling by array of bone marrow and peripheral blood samples from childhood leukemia patients", "created": "Jun.20, 2014", "summary": "We examined published microarray data from 104 acute lymphoblastic leukaemia patient specimens, that represent six different subgroups defined by cytogenetic features and immunophenotypes. Using the decision-tree based supervised learning algorithm Random Forest (RF), we determined a small set of genes for optimal subgroup distinction and subsequently validated their predictive power in an independent cohort of 68 specimens that were assessed using Affymetrix HG-U133A arrays.", "source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-TABM-125", "species": "human", "sample_source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-TABM-125/samples/"}