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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="Tg1 D1 IL IFN"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">interferon-gamma</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="WT1 D1 IL IFN"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">interferon-gamma</item><item key="GENOTYPE">wild_type</item></item></item><item><item key="Tg1 D1 IL IFN"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">interferon-gamma</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="WT1 D1 IL IFN"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">interferon-gamma</item><item key="GENOTYPE">wild_type</item></item></item><item><item key="Tg1 D1 IL IFN"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">interferon-gamma</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="WT1 D1 IL IFN"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">interferon-gamma</item><item key="GENOTYPE">wild_type</item></item></item><item><item key="WT1 D1 IL TNF"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">wild_type</item></item></item><item><item key="Tg1 D1 IL TNF"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="Tg1 D2 IL TNF"><item key="TIME">48</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="WT1 D1 IL TNF"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">wild_type</item></item></item><item><item key="Tg1 D2 IL TNF"><item key="TIME">48</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="Tg1 D1 IL TNF"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="WT1 D2 IL TNF"><item key="TIME">48</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">wild_type</item></item></item><item><item key="Tg1 D2 IL TNF"><item key="TIME">48</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="WT1 D1 IL TNF"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">wild_type</item></item></item><item><item key="Tg1 D1 IL TNF"><item key="TIME">24</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">DcR3 transgenic</item></item></item><item><item key="WT1 D2 IL TNF"><item key="TIME">48</item><item key="COMPOUND1">IL-1beta</item><item key="COMPOUND2">tumor necrosis factor alpha</item><item key="GENOTYPE">wild_type</item></item></item></item><item key="id">8104</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">[u'The islet primary non-function (PNF) is a serious problem in islet transplantation. In this study, we investigated whether...</item><item key="geo_gse_id">E-MEXP-2306</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">4</item><item key="sample_count">17</item><item key="tags"/><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-of-mouse-pancreatic-islets</item><item key="geo_id_plat">E-MEXP-2306_A-AFFY-45</item><item key="name">Transcription profiling of mouse pancreatic islets from wild type and DcR3 transgenic mice to investigate primary non-function (PNF) in islet transplantation</item><item key="created">Nov.21, 2014</item><item key="summary">[u'The islet primary non-function (PNF) is a serious problem in islet transplantation. In this study, we investigated whether DcR3-secreting transgenic (Tg) islets could reduce PNF. We generated transgenic mice expressing human DcR3. The transgenically expressed DcR3 protected islets from IFN-gama plus IL-1beta, or TNF-alpha plus IL-1beta-induced dysfunction and apoptosis in vitro. The Tg islets presented significantly reduced PNF after transplantation. ', {u'br': None}, {u'br': None}, u' Three independent batches of islet isolation were carried out. For each batch, islets were obtained from 4 Tg and 4 WT mice, and pooled respectively. The pooled islets (Tg or WT) were then divided into 4 groups: 2 were cultured in the presence of IFN-gamma (0.5 ug/ml) plus IL-1beta (0.5 ng/ml) with 1 harvested at 24 h and 1 harvested at 48 h; 2 were cultured in the presence of TNF-alpha (100 ng/ml) plus IL-1beta (0.5 ng/ml) with 1 harvested at 24 h and 1 harvested at 48 h.  Each treatment employed 3 chips using RNA from 3 different batches of islet isolation. For each treatment, genes with a mean signal strength difference above 2-fold between Tg and WT islets were selected for reverse PCR confirmation.']</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2306</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2306/samples/</item></data></biogps>
