<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">5130</item><item key="factors"><item><item key="PC3 24h control"><item key="disease state">prostate carcinoma</item><item key="time">24</item><item key="cell line">PC3</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 24h iberin"><item key="disease state">prostate carcinoma</item><item key="time">24</item><item key="cell line">PC3</item><item key="treatment">iberin 15 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 24h sulforaphane"><item key="disease state">prostate carcinoma</item><item key="time">24</item><item key="cell line">PC3</item><item key="treatment">sulforaphane 15 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 6d 5-aza"><item key="disease state">prostate carcinoma</item><item key="time">6</item><item key="cell line">PC3</item><item key="treatment">5-azacytidine 20 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 6d 5-aza and TSA"><item key="disease state">prostate carcinoma</item><item key="time">6</item><item key="cell line">PC3</item><item key="treatment">5-azacytidine 20 micromolar and TSA 0.33 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 6d control"><item key="disease state">prostate carcinoma</item><item key="time">6</item><item key="cell line">PC3</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 6d genistein"><item key="disease state">prostate carcinoma</item><item key="time">6</item><item key="cell line">PC3</item><item key="treatment">genistein 20 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 6d iberin"><item key="disease state">prostate carcinoma</item><item key="time">6</item><item key="cell line">PC3</item><item key="treatment">iberin 3 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 6d sulforaphane"><item key="disease state">prostate carcinoma</item><item key="time">6</item><item key="cell line">PC3</item><item key="treatment">sulforaphane 3 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="PC3 6d EGCG"><item key="disease state">prostate carcinoma</item><item key="time">6</item><item key="cell line">PC3</item><item key="treatment">epigallocatechin gallate 20 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h control 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h control 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h control 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h iberin 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">iberin 15 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h iberin 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">iberin 15 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h iberin 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">iberin 15 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h Sulforaphane 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">sulforaphane 15 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h Sulforaphane 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">sulforaphane 15 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 24h Sulforaphane 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">sulforaphane 15 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 6d 5-aza"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">5-azacytidine 20 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 6d control"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 6d EGCG"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">epigallocatechin gallate 20 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 6d genistein"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">genistein 20 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 6d iberin"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">iberin 3 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="epithelial 6d sulforaphane"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">sulforaphane 3 micromolar</item><item key="cell type">epithelial cell</item></item></item><item><item key="stroma 24h control 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 24h control 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 24h control 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 24h iberin 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">iberin 15 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 24h iberin 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">iberin 15 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 24h iberin 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">iberin 15 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 24h Sulforaphane 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">sulforaphane 15 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 24h Sulforaphane 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">sulforaphane 15 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 24h Sulforaphane 1"><item key="disease state">benign prostatic hyperplasia</item><item key="time">24</item><item key="cell line">primary cells</item><item key="treatment">sulforaphane 15 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 6d 5-aza"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">5-azacytidine 20 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 6d control"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">dimethyl sulfoxide 0.1 volume percent</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 6d EGCG"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">epigallocatechin gallate 20 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 6d genistein"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">genistein 20 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 6d iberin"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">iberin 3 micromolar</item><item key="cell type">stromal cell</item></item></item><item><item key="stroma 6d sulforaphane"><item key="disease state">benign prostatic hyperplasia</item><item key="time">6</item><item key="cell line">primary cells</item><item key="treatment">sulforaphane 3 micromolar</item><item key="cell type">stromal cell</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">[u'BACKGROUND: Broccoli consumption has been associated with a reduction in risk of prostate cancer. Isothiocyanates (ITC) derived from...</item><item key="pubmed_id">19489030</item><item key="geo_gse_id">E-MEXP-2034</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">5</item><item key="sample_count">40</item><item key="tags"><item>cancer</item><item>genome</item><item>prostate</item><item>prostate cancer</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-by-array-of-human-primar-8</item><item key="geo_id_plat">E-MEXP-2034_A-AFFY-44</item><item key="name">Transcription profiling by array of human primary prostate epithelial and stromal cells after treatment with 4-methylsulphinylbutyl and 3-methylsulphinypropyl isothiocyanates</item><item key="created">Sep.22, 2014</item><item key="summary">[u'BACKGROUND: Broccoli consumption has been associated with a reduction in risk of prostate cancer. Isothiocyanates (ITC) derived from glucosinolates that accumulate in broccoli are potential dietary compounds that may mediate these health effects. Sulforaphane (SF, 4-methylsulphinylbutyl ITC) accumulates in heading broccoli (calabrese) and iberin (IB, 3-methylsulphinypropyl ITC) accumulates in sprouting broccoli. While, there are many studies regarding the biological activity of SF, there are few studies associated with IB.  Moreover, the majority of studies have been undertaken with transformed cells, usually epithelial in origin, that have cancerous phenotypes.  ', {u'br': None}, u'METHOD:  Primary epithelial and stromal cells were derived from benign prostatic hyperplasia tissue.  Affymetrix U133 Plus 2.0 whole genome arrays were used to quantify global gene expression changes in these cells, following exposure to physiologically appropriate concentrations of SF and IB.  Ontology and pathway analyses were used to interpret results. Changes in expression of a subset of genes were confirmed by RT PCR.', {u'br': None}, u'RESULTS: Global gene expression profiling identified epithelial and stromal specific gene expression profiles. IB and SF induced different changes in gene expression in both epithelial and stromal cells but these changes were associated with similar functions', {u'br': None}, u'CONCLUSION: This data suggests that IB and SF both induce genes associated with cancer prevention, and IB should be further investigated as a potential chemo-preventative target.  ', {u'br': None}]</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2034</item><item key="species">human</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2034/samples/</item></data></biogps>
