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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">8061</item><item key="factors"><item><item key="4470a"><item key="genotype">dcrfl/fl; R26R-yfp</item></item></item><item><item key="4470a"><item key="genotype">dcrfl/fl; R26R-yfp</item></item></item><item><item key="4470a"><item key="genotype">dcrfl/fl; R26R-yfp</item></item></item><item><item key="4470a"><item key="genotype">dcrfl/fl; R26R-yfp</item></item></item><item><item key="4470a"><item key="genotype">dcrfl/fl; R26R-yfp</item></item></item><item><item key="4470a"><item key="genotype">dcrfl/fl; R26R-yfp</item></item></item><item><item key="4483a"><item key="genotype">dcrfl/+; R26R-yfp</item></item></item><item><item key="4483a"><item key="genotype">dcrfl/+; R26R-yfp</item></item></item><item><item key="4483a"><item key="genotype">dcrfl/+; R26R-yfp</item></item></item><item><item key="4483a"><item key="genotype">dcrfl/+; R26R-yfp</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Abelson virus (v-Abl)-transformed pre-B cell lines from BM of dcrfl/fl; R26R-yfp (4470; 4475) and dcrfl/+; R26R-yfp mice (4483) are...</item><item key="pubmed_id">18329371</item><item key="geo_gse_id">E-MEXP-1455</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">10</item><item key="tags"><item>cell</item><item>protein</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-of-mouse-abl-pre-b-cell-li</item><item key="geo_id_plat">E-MEXP-1455_A-AFFY-45</item><item key="name">Transcription profiling of mouse Abl pre-B cell lines with conditional deletion of dicer</item><item key="created">Nov.21, 2014</item><item key="summary">Abelson virus (v-Abl)-transformed pre-B cell lines from BM of dcrfl/fl; R26R-yfp (4470; 4475) and dcrfl/+; R26R-yfp mice (4483) are treated with a transducible Cre protein (Tat-Cre) to induce deletion of the dicer-1 gene in vitro. Cre activity is conveniently monitored by concomitant expression of YFP. To obtain Dicer KO cells, YFP+ cells from dcrfl/fl; R26R-yfp (4470_YFP; 4475_YFP) cultures treated with Tat-cre were isolated by fluorescence-activated cell sorting (FACS) and further propagated in cell culture. As controls, we used non-deleted, YFP- cells sorted from dcrfl/fl; R26R-yfp cultures (4470; 4475) treated with Tat-cre, and YFP+ deleted cells from dcrfl/+; R26R-yfp cultures (4483_YFP). To validate this system, various cell populations were sorted and analyzed for Dicer protein and miRNA expression. In the Dicer KO pro-B cell lines, Western analysis indicated that Dicer protein was efficiently ablated, and Northern blots demonstrated that the levels of mature miR-17 and miR-191 were drastically reduced.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-1455</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-1455/samples/</item></data></biogps>
