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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">7941</item><item key="factors"><item><item key="GSE9188GSM232046"/></item><item><item key="GSE9188GSM232047"/></item><item><item key="GSE9188GSM232048"/></item><item><item key="GSE9188GSM232049"/></item><item><item key="GSE9188GSM232050"/></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Self-renewal is a defining characteristic of stem cells, however the molecular pathways underlying its regulation are poorly understood....</item><item key="pubmed_id">18462698</item><item key="geo_gse_id">E-GEOD-9188</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">0</item><item key="sample_count">5</item><item key="tags"><item>bone</item><item>bone marrow</item><item>cell</item><item>compartment</item><item>stem cell</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-of-mouse-long-term-hsc-fro</item><item key="geo_id_plat">E-GEOD-9188_A-AFFY-45</item><item key="name">Transcription profiling of mouse long term HSC from control or Pbx1-null mice</item><item key="created">Nov.18, 2014</item><item key="summary">Self-renewal is a defining characteristic of stem cells, however the molecular pathways underlying its regulation are poorly understood.  Here we demonstrate that conditional inactivation of the Pbx1 proto-oncogene in the hematopoietic compartment results in a progressive loss of long-term hematopoietic stem cells (LT-HSCs) that is associated with concomitant reduction in their quiescence, leading to a defect in the maintenance of self-renewal as assessed by serial transplantation.  Transcriptional profiling revealed that multiple stem cell maintenance factors are perturbed in Pbx1-deficient LT-HSCs, which prematurely express a large subset of genes, including cell cycle regulators, normally expressed in non-self-renewing multipotent progenitors.  A significant proportion of Pbx1-dependent genes are associated with the Tgf-b pathway, which serves a major role in maintaining HSC quiescence.  Pbx1-deficient LT-HSCs are unable to up-regulate the cyclin dependent kinase inhibitor p57 in response to Tgf-b, providing a mechanism through which Pbx1 maintenance of stem cell self-renewal is achieved.  Experiment Overall Design: Highly efficient Pbx1 deletion was induced with poly(I:C) in 3 young MxCre+.Pbx1f/f mutant or 2 MxCre-.Pbx1f/f control mice. LT-HSC (Lin-cKit+Sca1+CD34-CD135-) cells were prospectively sorted from bone marrow of individual mice harvested 4 weeks after the last injection of poly(I:C).</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-9188</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-9188/samples/</item></data></biogps>
