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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM1468777"><item key="CALCINEURIN GENE CNB1 DELETED">no</item><item key="TREATMENT">corn oil</item></item></item><item><item key="GSM1468777"><item key="CALCINEURIN GENE CNB1 DELETED">no</item><item key="TREATMENT">corn oil</item></item></item><item><item key="GSM1468777"><item key="CALCINEURIN GENE CNB1 DELETED">no</item><item key="TREATMENT">corn oil</item></item></item><item><item key="GSM1468777"><item key="CALCINEURIN GENE CNB1 DELETED">no</item><item key="TREATMENT">corn oil</item></item></item><item><item key="GSM1468777"><item key="CALCINEURIN GENE CNB1 DELETED">no</item><item key="TREATMENT">corn oil</item></item></item><item><item key="GSM1468782"><item key="CALCINEURIN GENE CNB1 DELETED">yes</item><item key="TREATMENT">tamoxifen</item></item></item><item><item key="GSM1468782"><item key="CALCINEURIN GENE CNB1 DELETED">yes</item><item key="TREATMENT">tamoxifen</item></item></item><item><item key="GSM1468782"><item key="CALCINEURIN GENE CNB1 DELETED">yes</item><item key="TREATMENT">tamoxifen</item></item></item><item><item key="GSM1468782"><item key="CALCINEURIN GENE CNB1 DELETED">yes</item><item key="TREATMENT">tamoxifen</item></item></item><item><item key="GSM1468782"><item key="CALCINEURIN GENE CNB1 DELETED">yes</item><item key="TREATMENT">tamoxifen</item></item></item></item><item key="id">7688</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Activated NOTCH1 induces T-ALL in mice when transduced in bone marrow (BM) cells. T-ALL cells activate the calcineurin/NFAT pathway in...</item><item key="geo_gse_id">E-GEOD-60258</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">10</item><item key="tags"><item>bone</item><item>bone marrow</item><item>leukemia</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">calcineurin-dependent-transcriptome-in-icn1-activa</item><item key="geo_id_plat">E-GEOD-60258_A-AFFY-45</item><item key="name">Calcineurin-dependent transcriptome in ICN1 (activated NOTCH1)-induced T cell acute lymphoblastic leukemia (T-ALL)</item><item key="created">Nov.12, 2014</item><item key="summary">Activated NOTCH1 induces T-ALL in mice when transduced in bone marrow (BM) cells. T-ALL cells activate the calcineurin/NFAT pathway in vivo (Medyouf H. et al. Nat Med 2007 [PMID 17515895]). Through appropriate crosses, mouse ICN1-induced T-ALL were generated that include a ROSCreERT2 transgene and 2 copies of a CnB1 floxed alleles. Cohorts of secondary recipient mice were injected with these T-ALL cells, and when becoming leukemic, divided into 2 subgroups. Group 1 was treated with Tamoxifen (TAM), resulting in CnB1 gene deletion and inactivation of calcineurin. Group 2 was treated with carrier solvent (corn OIL), thus maintaining CnB1 and calcineurin activity. RNAs were extracted from flow cytometry-sorted leukemic cells. Details in Gachet S. et al. Leukemia 2013 (PMID 23689515).</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-60258</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-60258/samples/</item></data></biogps>
