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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">9345</item><item key="factors"><item><item key="GSE5996GSM139268"/></item><item><item key="GSE5996GSM139268"/></item><item><item key="GSE5996GSM139268"/></item><item><item key="GSE5996GSM139268"/></item><item><item key="GSE5996GSM139268"/></item><item><item key="GSE5996GSM139268"/></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">11</item><item key="summary_wrapped">Neonatal rat ventricular cardiomyocytes (NRVCMs) were stretched biaxially (112%/24h) or stimulated with phenylephrine (PE, 50 uM), both...</item><item key="pubmed_id">18158353</item><item key="geo_gse_id">E-GEOD-5996</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">0</item><item key="sample_count">6</item><item key="tags"><item>cytokine</item><item>protein</item></item><item key="lastmodified">Feb.09, 2015</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-of-rat-neonatal-ventricu-2</item><item key="geo_id_plat">E-GEOD-5996_A-AFFY-43</item><item key="name">Transcription profiling of rat neonatal ventricular cardiomyocytes (NRVCMs) stretched biaxially (112%/24h) or stimulated with phenylephrine (PE, 50 uM</item><item key="created">Jan.09, 2015</item><item key="summary">Neonatal rat ventricular cardiomyocytes (NRVCMs) were stretched biaxially (112%/24h) or stimulated with phenylephrine (PE, 50 uM), both resulting in a similar degree of hypertrophy. Unstretched NRVCMs served as negative control. Affymetrix microarray analysis revealed 164 genes more than 2.0-fold up- and 21 genes less than 0.5-fold downregulated (p&lt;0.01). Differential expression was confirmed by real-time PCR. Several genes of the &#8220;fetal gene program&#8221;, i.e. BNP (4.2-fold, all p&lt;0.05) were induced by stretch as well as PE. We also verified the upregulation of known stretch-responsive genes, including HSP70 (20.9x) and c-myc (3.0x). Moreover, we identified genes exclusively induced by stretch, such as the cardioprotective and antihypertrophic cytokine GDF15 (24.8x) and the antihypertrophic factor heme oxygenase 1 (Hmox1, 10.8x; both confirmed on protein level). Of note, neither PE nor endothelin-1 were able to upregulate GDF15 and Hmox1, while angiotensin II significantly induced both genes. Conversely, addition of the AT1 receptor blocker irbesartan markedly blunted stretch-mediated GDF15 and Hmox1 induction, suggesting that the angiotensin II receptor mediates stretch-dependent signals.   In conclusion, we report a comprehensive gene expression profile of cardiomyocytes subjected to biomechanical stress in comparison to pharmacologically induced hypertrophy. Our data imply that a stretch-specific gene program exists, that is mediated, at least in part, by angiotensin-II-dependent signalling. Experiment Overall Design: Three conditions were compared with two replicates each. These are: Experiment Overall Design: (1) control, i.e. no treatment; (2) induction by phenylephrine (50 uM); (3) induction by biomechanical stretch (112%/24h)</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-5996</item><item key="species">rat</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-5996/samples/</item></data></biogps>
