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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">2008</item><item key="factors"><item><item key="GSM1358030"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358030"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358030"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358027"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358027"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358027"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358024"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM1358024"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM1358024"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM135802"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM135802"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM135802"><item key="TIME">24h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 24h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM1358018"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358018"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358018"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358015"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358015"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358015"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">miR28</item></item></item><item><item key="GSM1358012"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM1358012"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM1358012"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">B</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM1358009"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM1358009"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">control</item></item></item><item><item key="GSM1358009"><item key="TIME">12h</item><item key="TREATMENT">Doxycycline [0.1ug/ml], 12h</item><item key="BULK POPULATION">A</item><item key="GENOTYPE">control</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Burkitt lymphoma (BL) is a highly aggressive B cell non-Hodgkin lymphoma (B-NHL), which originates from germinal center (GC) B cells and...</item><item key="pubmed_id">24843176</item><item key="geo_gse_id">E-GEOD-56268</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">4</item><item key="sample_count">24</item><item key="tags"><item>burkitt lymphoma</item><item>cell</item><item>hodgkin lymphoma</item><item>line</item><item>lymphoma</item><item>non-hodgkin lymphoma</item><item>spindle</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">mir-28-expression-in-the-burkitt-lymphoma-cell-lin</item><item key="geo_id_plat">E-GEOD-56268_A-AFFY-44</item><item key="name">miR-28 expression in the Burkitt lymphoma cell line P3HR1</item><item key="created">Jul.10, 2014</item><item key="summary">Burkitt lymphoma (BL) is a highly aggressive B cell non-Hodgkin lymphoma (B-NHL), which originates from germinal center (GC) B cells and harbors translocations deregulating the MYC oncogene. A comparative analysis of microRNAs (miRNAs) expressed in normal and malignant GC B cells identified miR-28 as significantly down-regulated in BL, as well as in other GC-derived B-NHL. We show that re-expression of miR-28 impairs cell growth and clonogenic properties of BL cells by modulating several targets including MAD2L1, a component of the spindle checkpoint whose down-regulation is essential in mediating miR-28-induced growth-arrest, and BAG1, an activator of the ERK pathway. P3HR1 Burkitt lymphoma cell line was engineered to display inducible expression of GFP alone or GFP in combination with the miR-28 precursor from the pRTS1 vector upon doxycycline treatment. Two bulk populations (A and B) were established for both the control (GFP alone) and the miR28-expressing (GFP and miR-28 precursor) cells. Cells were induced with 0.1ug/ml doxycycline for 12h or 24h. Induction was performed on each bulk population in triplicates.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-56268</item><item key="species">human</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-56268/samples/</item></data></biogps>
