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Home › Dataset Library › Gene-expression profiles of ovarian cancer regarding its microenvironment

Dataset: Gene-expression profiles of ovarian cancer regarding its microenvironment

PD-L1 suppresses host immunity and promotes tumor growth. We investigated how IFN-γ regulates PD-L1 in the ovarian cancer...

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PD-L1 suppresses host immunity and promotes tumor growth. We investigated how IFN-γ regulates PD-L1 in the ovarian cancer microenvironment. In clinical samples, the number of stromal CTLs in peritoneally disseminated tumors was correlated with PD-L1 expression on the tumor cells, and the lymphocyte number was significantly related to the IFN-γ signature score. In mouse models, PD-L1 was induced in peritoneal disseminated tumors, where lymphocytes were prominent, but not in subcutaneous tumors. Depleting IFNGR1 resulted in lower PD-L1 expression and longer survival in peritoneal dissemination model. Injection of IFN-γ into subcutaneous tumors increased PD-L1 expression and tumor size, and PD-L1 depletion abrogated tumor growth. These data suggest that IFN-γ works as a tumor progressor through PD-L1 induction. The source of IFN-γ in ovarian cancer microenvironment and its biological effect to the tumor cells is unclear. The immortalized human ovarian surface epithelial cell line, HOSE-E7/hTERT (HOSE) was treated with IFN-γ and expression microarray analysis was performed, and probes showing significantly higher values in IFN-γ-added group were termed “IFN-γ signature genes (295 probes)”. We then applied this signature to our ovarian cancer microarray data, which included 75 ovarian cancer clinical samples, by means of ss-GSEA. IFN-γ signature score was strongly correlated to the number of infiltrating CD4-positive or CD8-positive lymphocytes in the tumors. These data suggest that the IFN-γ in the ovarian cancer microenvironment is derived from lymphocytes, and an IFN-γ-rich microenvironment is strongly correlated to a lymphocyte-rich microenvironment. Genome-wide transcriptional changes in human ovarian cancer tissue were observed in different tumor immunological microenvironment.

Species:
human

Samples:
12

Source:
E-GEOD-55512

Updated:
Dec.12, 2014

Registered:
Jul.11, 2014


Factors: (via ArrayExpress)
Sample MICROENVIRONMENT_CD4POSITIVE_CELL_NUMBER AGE HISTOLOGICAL SUBTYPE FIGO STAGE MICROENVIRONMENT_CD8POSITIVE_CELL_NUMBER
GSM1338415 6 60-69 serous 3c 12
GSM1338414 1 60-69 serous 3c 0
GSM1338413 4 30-39 endometrioid 4 66
GSM1338412 0 60-69 mucinous 1c 7
GSM13384 48 60-69 serous 3c 547
GSM1338410 6 50-59 serous 2a 163
GSM1338409 13 30-39 clear 1a 133
GSM1338408 56 60-69 serous 3c 31
GSM1338407 0 50-59 clear 1c 0
GSM1338406 23 50-59 serous 3b 109
GSM1338405 41 70-79 serous 2c 73
GSM1338404 1 70-79 serous 3c 25

Tags

  • cancer
  • cell
  • epithelial cell
  • genome
  • line
  • lymphocyte
  • ovarian cancer
  • surface

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