<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="id">7526</item><item key="factors"><item><item key="GSM1290903"><item key="GENOTYPE">lean (C57BL/6J Lep +/+)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-</item></item></item><item><item key="GSM1290903"><item key="GENOTYPE">lean (C57BL/6J Lep +/+)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-</item></item></item><item><item key="GSM1290903"><item key="GENOTYPE">lean (C57BL/6J Lep +/+)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-</item></item></item><item><item key="GSM1290903"><item key="GENOTYPE">lean (C57BL/6J Lep +/+)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-</item></item></item><item><item key="GSM1290907"><item key="GENOTYPE">lean (C57BL/6J Lep +/+)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-+</item></item></item><item><item key="GSM1290907"><item key="GENOTYPE">lean (C57BL/6J Lep +/+)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-+</item></item></item><item><item key="GSM1290907"><item key="GENOTYPE">lean (C57BL/6J Lep +/+)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-+</item></item></item><item><item key="GSM1290907"><item key="GENOTYPE">lean (C57BL/6J Lep +/+)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-+</item></item></item><item><item key="GSM12909"><item key="GENOTYPE">obese leptin-deficient (C57BL/6J Lep ob/ob)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-</item></item></item><item><item key="GSM12909"><item key="GENOTYPE">obese leptin-deficient (C57BL/6J Lep ob/ob)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-</item></item></item><item><item key="GSM12909"><item key="GENOTYPE">obese leptin-deficient (C57BL/6J Lep ob/ob)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-</item></item></item><item><item key="GSM12909"><item key="GENOTYPE">obese leptin-deficient (C57BL/6J Lep ob/ob)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-</item></item></item><item><item key="GSM1290915"><item key="GENOTYPE">obese leptin-deficient (C57BL/6J Lep ob/ob)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-+</item></item></item><item><item key="GSM1290915"><item key="GENOTYPE">obese leptin-deficient (C57BL/6J Lep ob/ob)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-+</item></item></item><item><item key="GSM1290915"><item key="GENOTYPE">obese leptin-deficient (C57BL/6J Lep ob/ob)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-+</item></item></item><item><item key="GSM1290915"><item key="GENOTYPE">obese leptin-deficient (C57BL/6J Lep ob/ob)</item><item key="CELL TYPE">Macrophage of F4/80+, CD11b+, CD11c-+</item></item></item></item><item key="pop_total">0</item><item key="platform">6</item><item key="summary_wrapped">In mammals, expansion of adipose tissue mass induces accumulation of adipose tissue macrophages (ATMs). We isolated CD11c- (FB) and...</item><item key="pubmed_id">24315368</item><item key="geo_gse_id">E-GEOD-53403</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">16</item><item key="tags"><item>adipose tissue</item><item>genome</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-53403_A-AFFY-45</item><item key="slug">expression-data-from-mouse-adipose-tissue-macropha</item><item key="geo_gds_id"/><item key="name">Expression data from mouse adipose tissue macrophage</item><item key="created">Nov.12, 2014</item><item key="summary">In mammals, expansion of adipose tissue mass induces accumulation of adipose tissue macrophages (ATMs). We isolated CD11c- (FB) and CD11c+ (FBC) perigonadal ATMs from SVCs of lean (C57BL/6J Lep +/+) and obese leptin-deficient (C57BL/6J Lep ob/ob) mice. We used expression microarrays to generate transcription profiles of perigonadal ATMs from lean (C57BL/6J Lep +/+) and obese (C57BL/6J Lep ob/ob) mice. Profiling purified FBs and FBCs, we identified 521 transcripts whose expression was differentially (nominal p-value &lt; 0.01) expressed between FBs from lean and obese mice and 1509 genes whose expression was differentially (nominal p-value &lt;0.01) expressed between FBC from lean and obese mice RNA was isolated from sorted FBC (F4/80+, CD11b+, CD11c+) cells and FB ( F4/80+, CD11b+, CD11c-) cells and using RNeasy micro-kits (Qiagen), using a PicoPure RNA isolation kit then amplified two-rounds. Labeled cRNA Mouse Genome 430 2.0 arrays (purified FB and FBC adipose tissue macrophages.  There was a total of sixteen samples. FB and FBC populations were isolated from 4 lean and 4 obese mice.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-53403</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-53403/samples/</item></data></biogps>
