{"owner": "ArrayExpress Uploader", "ownerprofile_id": "arrayexpress_sid", "species": "human", "factors": [{"GSM1266798": {"KNOCKDOWN": "NIK", "CELL LINE": "Maver-1", "TREATMENT": "100ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF3 deletion"}}, {"GSM1266797": {"KNOCKDOWN": "NIK", "CELL LINE": "Maver-1", "TREATMENT": "0ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF3 deletion"}}, {"GSM1266798": {"KNOCKDOWN": "NIK", "CELL LINE": "Maver-1", "TREATMENT": "100ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF3 deletion"}}, {"GSM1266797": {"KNOCKDOWN": "NIK", "CELL LINE": "Maver-1", "TREATMENT": "0ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF3 deletion"}}, {"GSM1266794": {"KNOCKDOWN": "control", "CELL LINE": "Maver-1", "TREATMENT": "100ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF3 deletion"}}, {"GSM1266793": {"KNOCKDOWN": "control", "CELL LINE": "Maver-1", "TREATMENT": "0ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF3 deletion"}}, {"GSM1266792": {"KNOCKDOWN": "NIK", "CELL LINE": "Z-138", "TREATMENT": "100ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF2 nonsense"}}, {"GSM126679": {"KNOCKDOWN": "NIK", "CELL LINE": "Z-138", "TREATMENT": "0ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF2 nonsense"}}, {"GSM1266792": {"KNOCKDOWN": "NIK", "CELL LINE": "Z-138", "TREATMENT": "100ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF2 nonsense"}}, {"GSM126679": {"KNOCKDOWN": "NIK", "CELL LINE": "Z-138", "TREATMENT": "0ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF2 nonsense"}}, {"GSM1266788": {"KNOCKDOWN": "control", "CELL LINE": "Z-138", "TREATMENT": "100ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF2 nonsense"}}, {"GSM1266787": {"KNOCKDOWN": "control", "CELL LINE": "Z-138", "TREATMENT": "0ng/ml DOX", "NIK PATHWAY MUTATION": "TRAF2 nonsense"}}], "id": 2204, "pop_total": 0, "platform": 4, "summary_wrapped": "MCL lines were treated with or without 100ng/ml doxycycline for 7 days This experiment is designed to see if shRNA-mediated knockdown of...", "geo_gse_id": "E-GEOD-52435", "owner_profile": "/profile/8773/arrayexpressuploader", "factor_count": 4, "sample_count": 12, "tags": [], "lastmodified": "Dec.12, 2014", "is_default": false, "geo_gds_id": "", "slug": "transcriptional-responses-of-mantle-cell-lymphoma", "geo_id_plat": "E-GEOD-52435_A-AFFY-44", "name": "Transcriptional responses of mantle cell lymphoma (MCL) after NIK knockdown", "created": "Jul.11, 2014", "summary": "MCL lines were treated with or without 100ng/ml doxycycline for 7 days This experiment is designed to see if shRNA-mediated knockdown of NIK downregulates NFKB signaling in MCL lines with mutations in upstream regulators of the alternative pathway (TRAF2 & TRAF3) MCL cells carrying inducible non-targeting control (NTC) shRNA, NIKshRNA#1 (NIKsh#1), or NIKshRNA#2 (NIKsh#2) were seeded in 6well dishes and treated for 7 days with or without 100ng/ml doxycycline.", "source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-52435", "sample_source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-52435/samples/"}