<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">human</item><item key="factors"><item><item key="GSM1266798"><item key="KNOCKDOWN">NIK</item><item key="CELL LINE">Maver-1</item><item key="TREATMENT">100ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF3 deletion</item></item></item><item><item key="GSM1266797"><item key="KNOCKDOWN">NIK</item><item key="CELL LINE">Maver-1</item><item key="TREATMENT">0ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF3 deletion</item></item></item><item><item key="GSM1266798"><item key="KNOCKDOWN">NIK</item><item key="CELL LINE">Maver-1</item><item key="TREATMENT">100ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF3 deletion</item></item></item><item><item key="GSM1266797"><item key="KNOCKDOWN">NIK</item><item key="CELL LINE">Maver-1</item><item key="TREATMENT">0ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF3 deletion</item></item></item><item><item key="GSM1266794"><item key="KNOCKDOWN">control</item><item key="CELL LINE">Maver-1</item><item key="TREATMENT">100ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF3 deletion</item></item></item><item><item key="GSM1266793"><item key="KNOCKDOWN">control</item><item key="CELL LINE">Maver-1</item><item key="TREATMENT">0ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF3 deletion</item></item></item><item><item key="GSM1266792"><item key="KNOCKDOWN">NIK</item><item key="CELL LINE">Z-138</item><item key="TREATMENT">100ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF2 nonsense</item></item></item><item><item key="GSM126679"><item key="KNOCKDOWN">NIK</item><item key="CELL LINE">Z-138</item><item key="TREATMENT">0ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF2 nonsense</item></item></item><item><item key="GSM1266792"><item key="KNOCKDOWN">NIK</item><item key="CELL LINE">Z-138</item><item key="TREATMENT">100ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF2 nonsense</item></item></item><item><item key="GSM126679"><item key="KNOCKDOWN">NIK</item><item key="CELL LINE">Z-138</item><item key="TREATMENT">0ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF2 nonsense</item></item></item><item><item key="GSM1266788"><item key="KNOCKDOWN">control</item><item key="CELL LINE">Z-138</item><item key="TREATMENT">100ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF2 nonsense</item></item></item><item><item key="GSM1266787"><item key="KNOCKDOWN">control</item><item key="CELL LINE">Z-138</item><item key="TREATMENT">0ng/ml DOX</item><item key="NIK PATHWAY MUTATION">TRAF2 nonsense</item></item></item></item><item key="id">2204</item><item key="pop_total">0</item><item key="platform">4</item><item key="summary_wrapped">MCL lines were treated with or without 100ng/ml doxycycline for 7 days This experiment is designed to see if shRNA-mediated knockdown of...</item><item key="geo_gse_id">E-GEOD-52435</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">4</item><item key="sample_count">12</item><item key="tags"/><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcriptional-responses-of-mantle-cell-lymphoma</item><item key="geo_id_plat">E-GEOD-52435_A-AFFY-44</item><item key="name">Transcriptional responses of mantle cell lymphoma (MCL) after NIK knockdown</item><item key="created">Jul.11, 2014</item><item key="summary">MCL lines were treated with or without 100ng/ml doxycycline for 7 days This experiment is designed to see if shRNA-mediated knockdown of NIK downregulates NFKB signaling in MCL lines with mutations in upstream regulators of the alternative pathway (TRAF2 &amp; TRAF3) MCL cells carrying inducible non-targeting control (NTC) shRNA, NIKshRNA#1 (NIKsh#1), or NIKshRNA#2 (NIKsh#2) were seeded in 6well dishes and treated for 7 days with or without 100ng/ml doxycycline.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-52435</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-52435/samples/</item></data></biogps>
