{"owner": "ArrayExpress Uploader", "ownerprofile_id": "arrayexpress_sid", "species": "human", "factors": [{"GSM1256623": {"INDUCIBLE SHRNA": "inducible CHAF1A ShRNA day 10"}}, {"GSM1256623": {"INDUCIBLE SHRNA": "inducible CHAF1A ShRNA day 10"}}, {"GSM1256623": {"INDUCIBLE SHRNA": "inducible CHAF1A ShRNA day 10"}}, {"GSM1256620": {"INDUCIBLE SHRNA": "inducible CHAF1A ShRNA day 5"}}, {"GSM1256620": {"INDUCIBLE SHRNA": "inducible CHAF1A ShRNA day 5"}}, {"GSM1256620": {"INDUCIBLE SHRNA": "inducible CHAF1A ShRNA day 5"}}, {"GSM1256617": {"INDUCIBLE SHRNA": "uninduced"}}, {"GSM1256617": {"INDUCIBLE SHRNA": "uninduced"}}, {"GSM1256617": {"INDUCIBLE SHRNA": "uninduced"}}], "id": 2238, "pop_total": 0, "platform": 4, "summary_wrapped": "We used an inducible ShRNA system and microarrays to detail the global programme of gene expression underlying neuroblastoma...", "geo_gse_id": "E-GEOD-51978", "owner_profile": "/profile/8773/arrayexpressuploader", "factor_count": 1, "sample_count": 9, "tags": ["chromatin", "neuroblastoma"], "lastmodified": "Dec.12, 2014", "is_default": false, "geo_id_plat": "E-GEOD-51978_A-AFFY-44", "slug": "gene-expression-profiling-in-neuroblastoma-cells-u", "geo_gds_id": "", "name": "Gene expression profiling in neuroblastoma cells upon CHAF1A silencing", "created": "Jul.11, 2014", "summary": "We used an inducible ShRNA system and microarrays to detail the global programme of gene expression underlying neuroblastoma differentiation upon CHAF1A silencing . CHAF1A is a subunit of the Chromatin Assembly Factor-1 (CAF1) and regulates H3K9-trimethylation. High expression of CHAF1A strongly correlates with neuroblastoma poor prognosis and  loss-of-function drives neuronal differentiation in vitro and in vivo. Total RNA was isolated using RNAeasy kit from IMR32 cells transduced with inducible CHAF1A ShRNA. Gene expression profiling was performed in neuroblastoma cells upon CHAF1A silencing over time course (0, 5, and 10 days) in triplicate.", "source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-51978", "sample_source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-51978/samples/"}