<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM1240952"><item key="GENOTYPE">ICN1</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1240952"><item key="GENOTYPE">ICN1</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1240952"><item key="GENOTYPE">ICN1</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1240955"><item key="GENOTYPE">TEL-JAK2</item><item key="ORGANISM PART">thymus</item></item></item><item><item key="GSM1240955"><item key="GENOTYPE">TEL-JAK2</item><item key="ORGANISM PART">thymus</item></item></item><item><item key="GSM1240955"><item key="GENOTYPE">TEL-JAK2</item><item key="ORGANISM PART">thymus</item></item></item><item><item key="GSM1240955"><item key="GENOTYPE">TEL-JAK2</item><item key="ORGANISM PART">thymus</item></item></item></item><item key="id">7449</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">The TEL-JAK2 fusion oncogene and the ICN1 activated allele of NOTCH1 are the result of specific chromosomal translocations in T cell...</item><item key="geo_gse_id">E-GEOD-51243</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">7</item><item key="tags"><item>acute lymphoblastic leukemia</item><item>bone</item><item>bone marrow</item><item>cell</item><item>leukemia</item><item>lymphoblastic leukemia</item><item>thymus</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-51243_A-AFFY-45</item><item key="slug">comparison-of-the-transcriptome-of-tel-jak2-versus</item><item key="geo_gds_id"/><item key="name">Comparison of the transcriptome of TEL-JAK2- versus activated NOTCH1 (ICN1)-induced T cell acute lymphoblastic leukemias (mouse)</item><item key="created">Nov.12, 2014</item><item key="summary">The TEL-JAK2 fusion oncogene and the ICN1 activated allele of NOTCH1 are the result of specific chromosomal translocations in T cell acute lymphoblastic leukemia (T-ALL). Mouse models of these diseases (TEL-JAK2 transgenic mice; Carron C.  et al. Blood (2000); a bone marrow transplantation model for ICN1-induced T-ALL) were used  to compare the transcriptional program specific to each oncoprotein in mouse models of these leukemias. Tumor load was &gt;50% leukemic cells in all selected organs. Leukemic cells were collected from the thymus of terminally-ill TEL-JAK2 leukemic mice and bone marrow of terminally-ill ICN1 leukemic mice. RNA was extracted from each sample and processed for hybridization to Affymetrix arrays.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-51243</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-51243/samples/</item></data></biogps>
