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Home › Dataset Library › Expression profiling of the effect of high-fat diet, low-fat diet, CR and exercise on mice liver › Expression profiling of isolated populations of prepachytene spermatocytes, pachytene spermatocytes and spermatids of PWD and B6 males

Dataset: Expression profiling of isolated populations of prepachytene spermatocytes, pachytene spermatocytes and spermatids of PWD and B6 males

Expression profiling of isolated populations of prepachytene spermatocytes (LP), pachytene spermatocytes (RP) and spermatids (ST) from...

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Expression profiling of isolated populations of prepachytene spermatocytes (LP), pachytene spermatocytes (RP) and spermatids (ST) from PWD and B6 was performed to study the genome wide variation in gene expression between two mouse subspecies. To evaluate the transcriptional difference between B6 and PWD in during meiosis, we compared their transcriptomes in sorted populations of pre-pachytene primary spermatocytes (Leptonema, Zygotene and Pachytene), pachytene spermatocytes (Mid-late pachytene and diplotene) and spermatids. Populations of pre-pachytene spermatocytes, pachytene spermatocytes and spermatids were isolated from PWD and B6 mice. All populations were isolated in duplicates from two animals. Hence, RNA was prepared from 12 samples (= 2 strains x 3 tissues x 2 replicas) and was then subject to labeling and hybridization on microarray chips.

Species:
mouse

Samples:
12

Source:
E-GEOD-49444

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample STRAIN CELL TYPE
GSM1199293 PWD/Ph pachytene spermatocytes (RP)
GSM1199293 PWD/Ph pachytene spermatocytes (RP)
GSM1199295 PWD/Ph spermatids (ST)
GSM1199296 C57BL/6J pachytene spermatocytes (RP)
GSM1199296 C57BL/6J pachytene spermatocytes (RP)
GSM1199295 PWD/Ph spermatids (ST)
GSM1199299 C57BL/6J spermatids (ST)
GSM1199299 C57BL/6J spermatids (ST)
GSM119930 C57BL/6J prepachytene spermatocytes (LP)
GSM119930 C57BL/6J prepachytene spermatocytes (LP)
GSM1199303 PWD/Ph prepachytene spermatocytes (LP)
GSM1199303 PWD/Ph prepachytene spermatocytes (LP)

Tags

  • genome

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