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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM1191944"><item key="STABLE TRANSFECTION">vector control</item></item></item><item><item key="GSM1191944"><item key="STABLE TRANSFECTION">vector control</item></item></item><item><item key="GSM1191944"><item key="STABLE TRANSFECTION">vector control</item></item></item><item><item key="GSM119194"><item key="STABLE TRANSFECTION">TAGLN</item></item></item><item><item key="GSM119194"><item key="STABLE TRANSFECTION">TAGLN</item></item></item><item><item key="GSM119194"><item key="STABLE TRANSFECTION">TAGLN</item></item></item></item><item key="id">2350</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">[u'Transgelin was the top-ranked marker of metastatic potential identified in the comparison of node-positive colorectal cancer (CRC)...</item><item key="geo_gse_id">E-GEOD-48998</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">6</item><item key="tags"><item>cancer</item><item>colorectal cancer</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-data-of-tagln-overexpressing-rko-human</item><item key="geo_id_plat">E-GEOD-48998_A-AFFY-44</item><item key="name">Expression data of TAGLN-overexpressing RKO human colon cancer cells</item><item key="created">Jul.12, 2014</item><item key="summary">[u'Transgelin was the top-ranked marker of metastatic potential identified in the comparison of node-positive colorectal cancer (CRC) versus node-negative CRC in our previous study. Transgelin is localized in the nucleus of cultured CRC cells and microRNA-mediated knockdown of TAGLN (the gene encoding transgelin) expression modulates the expression of genes involved in the epithelial-to-mesenchymal transition. We performed gene expression profiling on control and transgelin-overexpressing RKO cells using Affymetrix microarray technology. The plasmid carrying TAGLN was generated using the pcDNA6.2/EmGFP-Bsd/V5-DEST vector (Invitrogen, Carlsbad, CA) and the pDONR221-TAGLN-mut plasmid from a previous study by an LR recombination reaction (', {u'a': {u'href': u'http://www.invitrogen.com', u'target': u'_blank', u'$': u'http://www.invitrogen.com'}}, u'). After lipofectamine-mediated transfection of the TAGLN-carrying plasmid or the vector-only control plasmid, stable transfectants were selected and cultured in medium containing 25 \u03bcg/ml blasticidin followed by RNA extraction and hybridization on Affymetrix microarrays. Six samples were obtained from three independent experiments (technical replicates).']</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-48998</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-48998/samples/</item></data></biogps>
