<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">human</item><item key="factors"><item><item key="GSM114602"><item key="DISEASE STATE">HIV- case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV-</item></item></item><item><item key="GSM114602"><item key="DISEASE STATE">HIV- case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV-</item></item></item><item><item key="GSM114602"><item key="DISEASE STATE">HIV- case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV-</item></item></item><item><item key="GSM1146018"><item key="DISEASE STATE">HIV+ case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV+</item></item></item><item><item key="GSM1146018"><item key="DISEASE STATE">HIV+ case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV+</item></item></item><item><item key="GSM1146018"><item key="DISEASE STATE">HIV+ case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV+</item></item></item><item><item key="GSM1146015"><item key="DISEASE STATE">HIV- case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">dead</item><item key="HIV STATUS">HIV-</item></item></item><item><item key="GSM1146015"><item key="DISEASE STATE">HIV- case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">dead</item><item key="HIV STATUS">HIV-</item></item></item><item><item key="GSM1146015"><item key="DISEASE STATE">HIV- case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">dead</item><item key="HIV STATUS">HIV-</item></item></item><item><item key="GSM1146012"><item key="DISEASE STATE">HIV+ case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">dead</item><item key="HIV STATUS">HIV+</item></item></item><item><item key="GSM1146012"><item key="DISEASE STATE">HIV+ case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">dead</item><item key="HIV STATUS">HIV+</item></item></item><item><item key="GSM1146012"><item key="DISEASE STATE">HIV+ case with invasive pneumococcal disease</item><item key="DISEASE OUTCOME">dead</item><item key="HIV STATUS">HIV+</item></item></item><item><item key="GSM1146009"><item key="DISEASE STATE">healthy control without invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV-</item></item></item><item><item key="GSM1146009"><item key="DISEASE STATE">healthy control without invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV-</item></item></item><item><item key="GSM1146009"><item key="DISEASE STATE">healthy control without invasive pneumococcal disease</item><item key="DISEASE OUTCOME">alive</item><item key="HIV STATUS">HIV-</item></item></item></item><item key="id">1223</item><item key="pop_total">0</item><item key="platform">3</item><item key="summary_wrapped">There is differential expression of genes between cases and controls using microarray analysis, and genes that are crucial for host...</item><item key="geo_gse_id">E-GEOD-47172</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">3</item><item key="sample_count">15</item><item key="tags"><item>disease</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-data-from-human-response-to-invasive-pn</item><item key="geo_id_plat">E-GEOD-47172_A-AFFY-33</item><item key="name">Expression data from human response to invasive pneumococcal disease.</item><item key="created">Jun.18, 2014</item><item key="summary">There is differential expression of genes between cases and controls using microarray analysis, and genes that are crucial for host defence responses are significantly up-regulated in cases during pneumococcal infection. Affymetrix microarray technology was used to compare the levels of mRNA between cases and controls and to evaluate whether  this is influenced by underlying HIV cormobidity, and if association with different disease outcomes (death vs. survival) exists.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-47172</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-47172/samples/</item></data></biogps>
