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PART">NA</item></item></item><item><item key="GSM1143886"><item key="TUMOR SUBTYPE">T-ALL</item><item key="ORGANISM PART">Peripheral blood</item></item></item><item><item key="GSM1143868"><item key="TUMOR SUBTYPE">t(9;22)</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1143889"><item key="TUMOR SUBTYPE">t(1;19)</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1143865"><item key="TUMOR SUBTYPE">11q23/MLL</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1143885"><item key="TUMOR SUBTYPE">T-ALL</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1143856"><item key="TUMOR SUBTYPE">dic(9;20)</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1143883"><item key="TUMOR SUBTYPE">t(12;21)</item><item key="ORGANISM PART">Peripheral blood</item></item></item><item><item key="GSM1143886"><item key="TUMOR SUBTYPE">T-ALL</item><item key="ORGANISM PART">Peripheral blood</item></item></item><item><item key="GSM1143787"><item key="TUMOR SUBTYPE">t(9;22)</item><item key="ORGANISM PART">Peripheral blood</item></item></item><item><item key="GSM1143873"><item key="TUMOR SUBTYPE">undefined</item><item key="ORGANISM PART">Peripheral blood</item></item></item><item><item key="GSM1143884"><item key="TUMOR SUBTYPE">t(12;21)</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1143865"><item key="TUMOR SUBTYPE">11q23/MLL</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1143877"><item key="TUMOR SUBTYPE">HeH</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM1143875"><item key="TUMOR SUBTYPE">NA</item><item key="ORGANISM PART">NA</item></item></item></item><item key="id">2281</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">We surveyed the genome-wide DNA methylation levels and gene expression patterns in patients with pediatric acute lymphoblastic leukemia....</item><item key="geo_gse_id">E-GEOD-47051</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">108</item><item key="tags"><item>acute lymphoblastic leukemia</item><item>genome</item><item>leukemia</item><item>lymphoblastic leukemia</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-47051_A-AFFY-44</item><item key="slug">genome-wide-differential-gene-expression-signature</item><item key="geo_gds_id"/><item key="name">Genome-wide differential gene expression signatures in pediatric acute lymphoblastic leukemia subtypes</item><item key="created">Jul.11, 2014</item><item key="summary">We surveyed the genome-wide DNA methylation levels and gene expression patterns in patients with pediatric acute lymphoblastic leukemia. Using Affymetrix U133 Plus 2.0 GeneChips, we identified a relatively small set of CpG sites that are highly correlated with gene expression.  Genome-wide expression analysis of 108 primary ALL samples by Affymetrix Human Genome U133 Plus 2.0 GeneChips used to investigate relationships between subtype-specific DNA methylation patterns and gene expression in 93 patients with both gene expression and DNA methylation data.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-47051</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-47051/samples/</item></data></biogps>
