Dataset: Expression data from rejection and non-rejection kidney transplant patients
Acute renal allograft rejection is an important complication in kidney transplantation. Accurate diagnosis of rejection events is...
Acute renal allograft rejection is an important complication in kidney transplantation. Accurate diagnosis of rejection events is necessary for timely response and treatment. We illustrate the usefulness and biological relevance of selected multivariate approaches to detect rejection from genomic and proteomic signals. The data was used to study gene expression changes using whole genome microarray analysis of peripheral blood from subjects with acute rejection (n=20) and non-rejecting controls (n=20) to obtain insight into the molecular and biological causation of acute renal allograft rejection when combined with proteomics (iTRAQ) data for the same patients/time-points. 40 Samples
- Species:
- human
- Samples:
- 40
- Source:
- E-GEOD-46474
- Updated:
- Dec.12, 2014
- Registered:
- Jul.11, 2014
Factors:
(via ArrayExpress)
| Sample | COLLECTION_DAY_POST_TX | SEX | PROCEDURE STATUS | AGE_TX | RACE | SAMPLE GROUP |
|---|---|---|---|---|---|---|
| GSM113085 | 7 | male | post-transplant non-rejection (NR) | 57.1 | Asian Oriental | control |
| GSM1130850 | 3 | female | post-transplant acute rejection (AR) | 71.8 | Caucasian | discovery |
| GSM1130849 | 28 | male | post-transplant non-rejection (NR) | 42.3 | Caucasian | control |
| GSM1130848 | 28 | female | post-transplant acute rejection (AR) | 20.3 | Caucasian | discovery |
| GSM1130847 | 7 | male | post-transplant non-rejection (NR) | 20.7 | Caucasian | control |
| GSM1130846 | 4 | male | post-transplant acute rejection (AR) | 50.2 | Caucasian | discovery |
| GSM1130845 | 8 | male | post-transplant non-rejection (NR) | 58.6 | Caucasian | control |
| GSM1130844 | 3 | male | post-transplant acute rejection (AR) | 43.4 | Caucasian | discovery |
| GSM1130843 | 7 | male | post-transplant non-rejection (NR) | 49.5 | Caucasian | control |
| GSM1130842 | 7 | male | post-transplant acute rejection (AR) | 49.7 | Caucasian | discovery |
| GSM113084 | 6 | female | post-transplant non-rejection (NR) | 50.8 | Caucasian | control |
| GSM1130840 | 3 | male | post-transplant acute rejection (AR) | 37.6 | Caucasian | discovery |
| GSM1130839 | 24 | female | post-transplant non-rejection (NR) | 54.6 | Caucasian | control |
| GSM1130838 | 24 | female | post-transplant acute rejection (AR) | 51.8 | Caucasian | discovery |
| GSM1130837 | 4 | male | post-transplant non-rejection (NR) | 56.8 | Asian Oriental | control |
| GSM1130836 | 4 | female | post-transplant acute rejection (AR) | 42 | Caucasian | discovery |
| GSM1130835 | 28 | male | post-transplant non-rejection (NR) | 40.1 | Caucasian | control |
| GSM1130834 | 28 | male | post-transplant acute rejection (AR) | 45.1 | Caucasian | discovery |
| GSM1130833 | 7 | female | post-transplant non-rejection (NR) | 47.3 | Caucasian | control |
| GSM1130832 | 2 | male | post-transplant acute rejection (AR) | 38 | Caucasian | discovery |
| GSM113083 | 6 | male | post-transplant non-rejection (NR) | 58.1 | Asian Indian | control |
| GSM1130830 | 6 | male | post-transplant acute rejection (AR) | 57.5 | Caucasian | discovery |
| GSM1130829 | 6 | female | post-transplant non-rejection (NR) | 47.6 | Caucasian | control |
| GSM1130828 | 4 | male | post-transplant acute rejection (AR) | 58.7 | Caucasian | discovery |
| GSM1130827 | 6 | female | post-transplant non-rejection (NR) | 55.3 | North American Indian | control |
| GSM1130826 | 6 | male | post-transplant acute rejection (AR) | 50.3 | Caucasian | discovery |
| GSM1130825 | 3 | male | post-transplant non-rejection (NR) | 46.6 | Caucasian | control |
| GSM1130824 | 3 | male | post-transplant acute rejection (AR) | 27 | Caucasian | discovery |
| GSM1130823 | 3 | male | post-transplant non-rejection (NR) | 58.4 | Caucasian | control |
| GSM1130822 | 3 | male | post-transplant acute rejection (AR) | 37 | Caucasian | discovery |
| GSM113082 | 7 | female | post-transplant non-rejection (NR) | 55.2 | Caucasian | control |
| GSM1130820 | 6 | male | post-transplant acute rejection (AR) | 31.8 | Caucasian | discovery |
| GSM1130819 | 8 | female | post-transplant non-rejection (NR) | 35.5 | Caucasian | control |
| GSM1130818 | 7 | male | post-transplant acute rejection (AR) | 55.4 | Caucasian | discovery |
| GSM1130817 | 7 | male | post-transplant non-rejection (NR) | 51.1 | Caucasian | control |
| GSM1130816 | 2 | female | post-transplant acute rejection (AR) | 38.8 | Asian Indian | discovery |
| GSM1130815 | 16 | female | post-transplant non-rejection (NR) | 44.8 | Caucasian | control |
| GSM1130814 | 16 | female | post-transplant acute rejection (AR) | 52.6 | Caucasian | discovery |
| GSM1130813 | 20 | male | post-transplant non-rejection (NR) | 50.3 | Caucasian | control |
| GSM1130812 | 20 | male | post-transplant acute rejection (AR) | 55.7 | Caucasian | discovery |