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Home › Dataset Library › Effects of tocilizumab versus methotrexate therapy on gene expression profiles in the early rheumatoid arthrtis synovium

Dataset: Effects of tocilizumab versus methotrexate therapy on gene expression profiles in the early rheumatoid arthrtis synovium

Rheumatoid arthritis (RA) is a chronic, systemic autoimmune inflammatory disease that is characterized by the presence of inflammatory...

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Rheumatoid arthritis (RA) is a chronic, systemic autoimmune inflammatory disease that is characterized by the presence of inflammatory cytokines, including interleukin-6 (IL-6). Here, we investigated the global molecular effects of Tocilizumab, an approved humanized anti-IL6 Receptor antibody, versus Methotrexate therapy, in synovial biopsy samples collected prospectively in early RA before and 12 weeks after administration of the drug. The results were compared with our previous data, generated in prospective cohorts of Adalimumab- and Rituximab-treated (Methotrexate- and anti-TNF-resistant, respectively) RA patients. We found that Tocilizumab induces a significant down-regulation of genes included in specific pathways: cytokines & chemokines (e.g. IL-6, IL-7, IL-22, CCL8, CCL11, CCL13, CCL19, CCL20), and T cell activation. By contrast, Tocilizumab induces a significant up-regulation of genes associated with healing processes. These effects are significantly more pronounced as compared to Methotrexate, Rituximab, or Adalimumab therapies. By opposition to the effects of Adalimumab, Tocilizumab therapy does not induce a decreased expression of genes involved in cell proliferation. Paired synovial biopsy samples were obtained from the affected knee of early RA patients before and 12 weeks after initiation of Tocilizumab (n=12) or Methotrexate (n=8) therapy. SDAI remission criteria were computed prospectively before, 3 months and 6 months after administration of the drugs and patients’ responses were defined according to their SDAI remission status at 6 months. Gene expression studies were performed using GeneChip Human Genome U133 Plus 2.0 arrays.

Species:
human

Samples:
40

Source:
E-GEOD-45867

PubMed:
24114646

Updated:
Dec.12, 2014

Registered:
Jul.11, 2014


Factors: (via ArrayExpress)
Sample AGE DISEASE ACTIVITY SCORE DAS-28CRP SEX
GSM1116972 59 1.61 male
GSM111697 59 3.06 male
GSM1116970 64 4.01 male
GSM1116969 64 4 male
GSM1116968 41 2.45 female
GSM1116967 41 3.21 female
GSM1116966 53 4.15 female
GSM1116965 53 2.89 female
GSM1116964 41 4.83 female
GSM1116963 41 5.52 female
GSM1116962 53 3.13 female
GSM111696 53 3.53 female
GSM1116960 61 2.36 female
GSM1116959 61 5.25 female
GSM1116958 67 6.72 female
GSM1116957 67 6.83 female
GSM1116956 48 2.68 female
GSM1116955 48 4.23 female
GSM1116954 66 2.41 female
GSM1116953 66 3.37 female
GSM1116952 58 3.31 male
GSM111695 58 4.74 male
GSM1116950 60 1.22 female
GSM1116949 60 3.99 female
GSM1116948 31 1.81 female
GSM1116947 31 2.6 female
GSM1116946 25 3.86 female
GSM1116945 25 4.09 female
GSM1116944 66 3.46 female
GSM1116943 66 6.88 female
GSM1116942 48 1.47 male
GSM111694 48 4.08 male
GSM1116940 29 1.21 female
GSM1116939 29 4.98 female
GSM1116938 41 2.64 female
GSM1116937 41 5.07 female
GSM1116936 49 1.22 male
GSM1116935 49 5.67 male
GSM1116934 65 2.89 female
GSM1116933 65 4.26 female

Tags

  • arthritis
  • cell
  • disease
  • genome
  • interleukin
  • interleukin-6
  • knee
  • rheumatoid arthritis

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