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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM1104140"><item key="GENOTYPE">wildtype</item></item></item><item><item key="GSM1104140"><item key="GENOTYPE">wildtype</item></item></item><item><item key="GSM1104140"><item key="GENOTYPE">wildtype</item></item></item><item><item key="GSM1104143"><item key="GENOTYPE">Sox4 overexpressing leukemic</item></item></item><item><item key="GSM1104143"><item key="GENOTYPE">Sox4 overexpressing leukemic</item></item></item><item><item key="GSM1104143"><item key="GENOTYPE">Sox4 overexpressing leukemic</item></item></item><item><item key="GSM1104146"><item key="GENOTYPE">K/L leukemic</item></item></item><item><item key="GSM1104146"><item key="GENOTYPE">K/L leukemic</item></item></item><item><item key="GSM1104146"><item key="GENOTYPE">K/L leukemic</item></item></item></item><item key="id">7216</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Mutation or epigenetic silencing of the transcription factor C/EBP&#945; is observed in ~10% of patients with acute myeloid leukemia (AML). In...</item><item key="geo_gse_id">E-GEOD-45430</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">9</item><item key="tags"><item>acute myeloid leukemia</item><item>leukemia</item><item>myeloid leukemia</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">sox4-is-a-key-oncogenic-target-in-cebp-mutant-acut</item><item key="geo_id_plat">E-GEOD-45430_A-AFFY-45</item><item key="name">Sox4 is a key oncogenic target in C/EBP&#945; mutant Acute Myeloid Leukemia</item><item key="created">Nov.12, 2014</item><item key="summary">Mutation or epigenetic silencing of the transcription factor C/EBP&#945; is observed in ~10% of patients with acute myeloid leukemia (AML). In both cases, a common global gene expression profile is observed, but down-stream targets relevant for leukemogenesis are not known. Here we identify Sox4 as a direct target of C/EBP&#945; whereby its expression is inversely correlated with C/EBP&#945; activity. Downregulation of Sox4 abrogated increased self-renewal of leukemic cells and restored their differentiation. Gene expression profiles of leukemia initiating cells (LICs) from both Sox4 overexpression and murine mutant C/EBP&#945; AML models clustered together, but differed from other types of AML. Our data demonstrate that Sox4 overexpression resulting from C/EBP&#945; inactivation contributes to the development of leukemias with a distinct LIC phenotype. K/L (bi-allelic Cebpa mutations) leukemic mice and Sox4 overexprssing leukemic mice were used for RNA extraction and hybridization on Affymetrix microarrays. We compared these microarray samples with the C57/BL6 wild type mice.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-45430</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-45430/samples/</item></data></biogps>
