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Home › Dataset Library › Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Dataset: Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

We sought to ascertain the time-course of transcriptional events that occur in human skeletal muscle at the outset of resistance exercise...

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We sought to ascertain the time-course of transcriptional events that occur in human skeletal muscle at the outset of resistance exercise (RE) training in RE naïve individuals, and determine if the magnitude of any response was associated with exercise induced muscle damage. Sixteen RE naïve males were recruited, 8 underwent 2 sessions of 5x30 maximum, isokinetic knee extensions (180°.s-1) separated by 48 hrs. Muscle biopsies of the vastus lateralis were taken at baseline and 24 hrs after each exercise bout. Eight individuals acted as non-exercise controls with biopsies obtained at the same time intervals. Transcriptional changes were assessed by microarray, and binding of HSP27 and αB-crystallin to insoluble proteins by immunohistochemistry as a measure of muscle damage. In control subjects, no probesets were significantly altered (FDR<0.05) and HSP27 and αB-crystallin binding remained unchanged throughout the study. In exercised subjects, significant inter-subject variability following the initial bout of RE was observed in the muscle transcriptome, with greatest changes occurring when HSP27 and αB-crystallin binding was elevated. Following the second bout of RE, the transcriptome response was more consistent among subjects revealing a cohort of probesets associated with immune activation, the suppression of oxidative metabolism and protein ubiquitination as differentially regulated. The results reveal that the initial transcriptional response to RE is highly variable in RE naïve volunteers, is associated with muscle damage, and unlikely to reflect longer-term adaptations to RE training. These results highlight the importance of considering multiple time-points when determining the transcriptional response to RE and associated physiological adaptation. 16 healthy male subjects were recruited and attended the laboratory fasted on 4 consecutive days. Biopsies from the vastus lateralis muscle were obtained on Days 0, 1 and 3, with total RNA extracted for gene expression analysis by microarray. During this period, 8 subjects performed isokinetic leg extension exercise using an isokinetic dynamometer (180 degrees per second; maximum intensity) on two occassions (days 0 and 2). Data for 7 exercise subjects presented in this study. 8 further subjects acted as non-exercised controls and did not participate in any exercise during the study period. A number of technical replicates were included and are identified in the sample list. Insufficient muscle biopsy sample or inadequate RNA quality accounted for 8 missing data points (TechRep1 N=40 as opposed to 48).

Species:
human

Samples:
45

Source:
E-GEOD-45426

Updated:
Dec.12, 2014

Registered:
Jul.11, 2014


Factors: (via ArrayExpress)
Sample TECH REP TIME PROTOCOL SUBJECT
GSM1104126 1of1 day 4 exercise (2 bouts) 15
GSM1104125 1of1 day 2 exercise (1 bout) 15
GSM1104124 1of1 day 1 exercise (baseline) 15
GSM1104123 1of1 day 4 control (non-exercised) 14
GSM1104122 1of1 day 2 control (non-exercised) 14
GSM110412 1of1 day 1 control (non-exercised) 14
GSM1104120 1of1 day 4 control (non-exercised) 13
GSM1104119 1of1 day 1 control (non-exercised) 13
GSM1104118 1of1 day 2 control (non-exercised) 12
GSM1104117 1of1 day 1 control (non-exercised) 12
GSM1104116 1of1 day 2 exercise (1 bout) 11
GSM1104115 1of1 day 1 exercise (baseline) 11
GSM1104114 1of1 day 4 control (non-exercised) 10
GSM1104113 1of1 day 1 control (non-exercised) 10
GSM1104112 1of1 day 2 exercise (1 bout) 9
GSM1104 1of1 day 1 exercise (baseline) 9
GSM1104110 1of1 day 4 control (non-exercised) 8
GSM1104109 1of1 day 2 control (non-exercised) 8
GSM1104108 1of1 day 1 control (non-exercised) 8
GSM1104107 1of1 day 4 exercise (2 bouts) 7
GSM1104106 1of1 day 2 exercise (1 bout) 7
GSM1104105 1of1 day 1 exercise (baseline) 7
GSM1104104 1of1 day 4 control (non-exercised) 6
GSM1104103 1of1 day 2 control (non-exercised) 6
GSM1104102 1of1 day 1 control (non-exercised) 6
GSM110410 1of1 day 4 exercise (2 bouts) 5
GSM1104100 1of1 day 2 exercise (1 bout) 5
GSM1104099 1of1 day 1 exercise (baseline) 5
GSM1104098 1of1 day 4 control (non-exercised) 4
GSM1104097 1of1 day 2 control (non-exercised) 4
GSM1104096 1of1 day 1 control (non-exercised) 4
GSM1104095 2of2 day 4 exercise (2 bouts) 3
GSM1104094 1of2 day 4 exercise (2 bouts) 3
GSM1104093 1of1 day 2 exercise (1 bout) 3
GSM1104092 1of1 day 1 exercise (baseline) 3
GSM110409 2of2 day 4 control (non-exercised) 2
GSM1104090 1of2 day 4 control (non-exercised) 2
GSM1104089 1of1 day 2 control (non-exercised) 2
GSM1104088 1of1 day 1 control (non-exercised) 2
GSM1104087 2of2 day 4 exercise (2 bouts) 1
GSM1104086 1of2 day 4 exercise (2 bouts) 1
GSM1104085 2of2 day 2 exercise (1 bout) 1
GSM1104084 1of2 day 2 exercise (1 bout) 1
GSM1104083 2of2 day 1 exercise (baseline) 1
GSM1104082 1of2 day 1 exercise (baseline) 1

Tags

  • knee
  • leg
  • muscle
  • protein
  • vastus lateralis

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