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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM1063988"><item key="SHRNA">ZEB1</item><item key="PHENOTYPE">epithelial</item><item key="CELL LINE">PC3-EMT1</item><item key="CELL TYPE">derived from PC3-Epi human prostate cancer epithelial cells</item></item></item><item><item key="GSM1063987"><item key="SHRNA">scrambled</item><item key="PHENOTYPE">mesenchymal</item><item key="CELL LINE">PC3-EMT1</item><item key="CELL TYPE">derived from PC3-Epi human prostate cancer epithelial cells</item></item></item><item><item key="GSM1063986"><item key="SHRNA">ZEB1</item><item key="PHENOTYPE">epithelial</item><item key="CELL LINE">PC3-EMT14</item><item key="CELL TYPE">derived from PC3-Epi human prostate cancer epithelial cells</item></item></item><item><item key="GSM1063985"><item key="SHRNA">scrambled</item><item key="PHENOTYPE">mesenchymal</item><item key="CELL LINE">PC3-EMT14</item><item key="CELL TYPE">derived from PC3-Epi human prostate cancer epithelial cells</item></item></item><item><item key="GSM1063984"><item key="SHRNA">none</item><item key="PHENOTYPE">mesenchymal</item><item key="CELL LINE">PC3-EMT14</item><item key="CELL TYPE">derived from PC3-Epi human prostate cancer epithelial cells</item></item></item><item><item key="GSM1063983"><item key="SHRNA">none</item><item key="PHENOTYPE">mesenchymal</item><item key="CELL LINE">PC3-EMT12</item><item key="CELL TYPE">derived from PC3-Epi human prostate cancer epithelial cells</item></item></item><item><item key="GSM1063982"><item key="SHRNA">none</item><item key="PHENOTYPE">mesenchymal</item><item key="CELL LINE">PC3-EMT1</item><item key="CELL TYPE">derived from PC3-Epi human prostate cancer epithelial cells</item></item></item><item><item key="GSM106398"><item key="SHRNA">none</item><item key="PHENOTYPE">epithelial</item><item key="CELL LINE">PC3-Epi</item><item key="CELL TYPE">derived from PC3 human prostate cancer epithelial cells</item></item></item></item><item key="id">2398</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">To study the mechanisms of the epithelial-mesenchymal transition (EMT) in prostate cancer metastasis, we first generated an epithelial...</item><item key="geo_gse_id">E-GEOD-43489</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">4</item><item key="sample_count">8</item><item key="tags"><item>cancer</item><item>cell</item><item>epithelial phenotype</item><item>line</item><item>mesenchymal cell</item><item>prostate</item><item>prostate cancer</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-profile-from-pce-epi-and-derived-cell-l</item><item key="geo_id_plat">E-GEOD-43489_A-AFFY-44</item><item key="name">Expression profile from PCE-Epi and derived cell lines</item><item key="created">Jul.12, 2014</item><item key="summary">To study the mechanisms of the epithelial-mesenchymal transition (EMT) in prostate cancer metastasis, we first generated an epithelial model cell line derived from prostate cancer epithelial PC3 cells. We isolated a subpopulation of cells that showed a stable epithelial phenotype in culture and designated them PC3-Epi. We next developed mesenchymal cell lines from PC3-Epi cells, through interactions with macrophages. These mesenchymal cell lines were designated PC3-EMT1, PC3-EMT12 and PC3-EMT14. We transfected two of these mesenchymal lines (PC3-EMT1 and PC3-EMT14) with lentiviral ZEB1-shRNA vector (sh4) or the scrambled control (Scr). Consistent with ZEB1's role in EMT and maintenance of the mesenchymal state, silencing of ZEB1 induced the mesenchymal-epithelial transition (MET) in PC3-EMT1 and PC3-EMT14. Cells were plated and allowed to recover for 2 days prior to RNA extraction. PC3-Epi served as a reference sample.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-43489</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-43489/samples/</item></data></biogps>
