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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM106223"><item key="VARIATION">Hif-2&#945;F/F</item></item></item><item><item key="GSM1062232"><item key="VARIATION">Hif-2&#945;&#916;IE</item></item></item></item><item key="id">7131</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">To investigate the detailed molecular mechanisms for the regulatory role of HIF-2&#945; in experimental colitis, microarray gene expression...</item><item key="geo_gse_id">E-GEOD-43416</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">2</item><item key="tags"><item>colitis</item><item>colon</item><item>disease</item><item>dss</item><item>ibd</item><item>inflammatory bowel disease</item><item>intestinal epithelium</item><item>intestine</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-43416_A-AFFY-45</item><item key="slug">gene-expression-profiles-of-colon-from-hif-2ff-hif</item><item key="geo_gds_id"/><item key="name">Gene Expression profiles of colon from Hif-2&#945;F/F, Hif-2&#945;l&#916;IE treated with DSS</item><item key="created">Nov.12, 2014</item><item key="summary">To investigate the detailed molecular mechanisms for the regulatory role of HIF-2&#945; in experimental colitis, microarray gene expression analysis was performed on colon RNA isolated from 6- to 8-week-old Hif-2&#945;F/F, Hif-2&#945;l&#916;IE mice treated with 3%DSS for 3 days. Background &amp; Aims: Hypoxic inflammation is characterized by decreased oxygen tension in inflammatory foci, and is a notable feature in inflammatory bowel disease (IBD). Hypoxic response is mediated by transcription factors hypoxia-inducible factor (HIF)-1&#945; and HIF-2&#945;, both of which are highly induced in IBD. HIF-1&#945; is a protective factor that limits intestinal barrier dysfunction during inflammation. However, the role of HIF-2&#945; has not been assessed in hypoxic inflammation and IBD.   Methods: A hypoxia reporter mouse model was used to test the presence of hypoxia and HIF-2&#945; in dextran sulfate sodium (DSS) and Citrobacter rodentium (C.rod)-induced colitis. The role of HIF-2&#945; in these mouse models of colitis was further assessed in mice with an intestinal epithelium-specific gain- and loss-of-function of HIF-2&#945;.   Results: Induction of hypoxia and HIF-2&#945; was confirmed in both murine experimental colitis models and human IBD samples. Disruption of HIF-2&#945; attenuated colonic inflammation whereas stabilization of HIF-2&#945; potentiated inflammation in mouse models of colitis. Interestingly, intestine specific overexpression of HIF-2&#945; but not HIF-1&#945; leads to spontaneous colitis and premature death in mice. Further mechanistic analysis showed that HIF-2&#945; is a driver for pro-inflammatory response and is critical regulator of intestinal epithelial-derived tumor necrosis factor (TNF)-&#945;. Blocking TNF-&#945; completely ameliorated HIF-2&#945; potentiated intestinal inflammation.   Conclusions: These data demonstrate that HIF-2&#945; is a critical transcription factor essential in intestinal epithelium elicited inflammatory response. Global gene expression profiling in colon RNAs isolated from 7-week-old Hif-2&#945;F/F (n=6, Shah 007) and Hif-2&#945;&#916;IE (n=5, Shah 008).</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-43416</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-43416/samples/</item></data></biogps>
