<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM105735"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult normal glandular stomach</item><item key="GENOTYPE">wild type</item></item></item><item><item key="GSM105735"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult normal glandular stomach</item><item key="GENOTYPE">wild type</item></item></item><item><item key="GSM105735"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult normal glandular stomach</item><item key="GENOTYPE">wild type</item></item></item><item><item key="GSM1057354"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic</item></item></item><item><item key="GSM1057354"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic</item></item></item><item><item key="GSM1057354"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic</item></item></item><item><item key="GSM1057357"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic; TNF-alpha knockout</item></item></item><item><item key="GSM1057357"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic; TNF-alpha knockout</item></item></item><item><item key="GSM1057357"><item key="STRAIN OR LINE">C57BL/6</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic; TNF-alpha knockout</item></item></item><item><item key="GSM1057360"><item key="STRAIN OR LINE">BALB/c</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic</item></item></item><item><item key="GSM1057360"><item key="STRAIN OR LINE">BALB/c</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic</item></item></item><item><item key="GSM1057360"><item key="STRAIN OR LINE">BALB/c</item><item key="ORGANISM PART">adult gastric tumor in glandular stomach</item><item key="GENOTYPE">Wnt1, Ptgs2, Ptges transgenic</item></item></item></item><item key="id">7120</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Gan mice express Wnt1, Ptgs2, and Ptges, which develop inflammation-associated gastric tumors (Oshima et al, Gastroenterology 131: 1086,...</item><item key="geo_gse_id">E-GEOD-43145</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">3</item><item key="sample_count">12</item><item key="tags"><item>stomach</item><item>wt1</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-43145_A-AFFY-45</item><item key="slug">expression-data-of-mouse-gastric-tumors-tnf-ko-gan</item><item key="geo_gds_id"/><item key="name">Expression data of mouse gastric tumors (TNF KO-Gan and BALB/c-Gan mice )</item><item key="created">Nov.12, 2014</item><item key="summary">Gan mice express Wnt1, Ptgs2, and Ptges, which develop inflammation-associated gastric tumors (Oshima et al, Gastroenterology 131: 1086, 2006).  We examined the role of TNF-alpha in tumorigenesis by construction of TNF-/- Gan mice.  We also examined genetic background difference in tumor phenotype by changing Gan mouse background from C57BL/6(B6) to BALB/c. Microarray analyses were performed to examine changes of expression profiles in tumors by TNF gene disruption or by changing genetic background. Total RNA was prepared from B6 Gan mice (n=3: Gan1-Gan3), B6-Gan TNF-/- mice (n=3: Gan(TNF KO)1-Gan(TNF KO)3), BALB-Gan mice (n=3: Gan(BALB/c)1-Gan(BALB/c)3), and wid-type normal glandular stomach (n=3: WT1-WT3).  We used Affymetrix microarrays for hybridization, and examined expression profiles.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-43145</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-43145/samples/</item></data></biogps>
