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Home › Dataset Library › PRDM14 Ensures a Naïve Pluripotency by a Dual Mechanism Involving Signaling and Epigenetic Pathways in Mouse Embryonic Stem Cells

Dataset: PRDM14 Ensures a Naïve Pluripotency by a Dual Mechanism Involving Signaling and Epigenetic Pathways in Mouse Embryonic Stem Cells

Mouse embryonic stem cells (mESCs) fluctuate between a naïve inner cell mass (ICM)-like state and a primed epiblast-like state of...

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Mouse embryonic stem cells (mESCs) fluctuate between a naïve inner cell mass (ICM)-like state and a primed epiblast-like state of pluripotency in serum, but are harnessed exclusively in a distinctive, apparently more naïve state of pluripotency (the ground state) with inhibitors for mitogen-activated protein kinase (MAPK) and glycogen synthase kinase 3 pathways (2i). Understanding the mechanism ensuring a naïve state of pluripotency would be critical in realizing a full potential of ESCs. We show here that PRDM14, a PR domain-containing transcriptional regulator, ensures a naïve pluripotency by a dual mechanism: Antagonizing fibroblast growth factor receptor (FGFR) signaling that is activated paradoxically by the core transcriptional circuitry for pluripotency and directs a primed state and repressing de novo DNA methyltransferases that create a primed epiblast-like epigenome. PRDM14 exerts these functions by recruiting polycomb repressive complex 2 (PRC2) specifically to key targets and repressing their expression. Mouse Embryonic Stem Cells (mESCs) or mESC-like cells with different Prdm14 genotypes {Prdm14(+/+), Prdm14(-/-), and Prdm14(-/-) rescued with Avitag-EGFP-Prdm14 transgene [Prdm14(-/-)+AGP14]} are cultured on MEF in different medium [2i, Serum(day 2), Serum+MEK inhibitor (PD0325901) (day 2), Serum without LIF (day2)].

Species:
mouse

Samples:
26

Source:
E-GEOD-42580

PubMed:
23333148

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample CULTURE CONDITIONS CELL TYPE VARIATION
GSM1045422 2i ESC-like cells Prdm14 Knockout, pPyCAG-AGP14 transgene
GSM1045422 2i ESC-like cells Prdm14 Knockout, pPyCAG-AGP14 transgene
GSM1045424 2i ESC-like cells Prdm14 Knockout
GSM1045424 2i ESC-like cells Prdm14 Knockout
GSM1045426 2i ESCs No genetic modification
GSM1045426 2i ESCs No genetic modification
GSM1045428 not specified epiblast like cells (EpiLCs) Blimp1-mVenus, Stella-ECFP(BVSC) transgene
GSM1045428 not specified epiblast like cells (EpiLCs) Blimp1-mVenus, Stella-ECFP(BVSC) transgene
GSM1045428 not specified epiblast like cells (EpiLCs) Blimp1-mVenus, Stella-ECFP(BVSC) transgene
GSM1045428 not specified epiblast like cells (EpiLCs) Blimp1-mVenus, Stella-ECFP(BVSC) transgene
GSM1045432 Serum without LIF (day2) ESC-like cells Prdm14 Knockout, pPyCAG-AGP14 transgene
GSM1045432 Serum without LIF (day2) ESC-like cells Prdm14 Knockout, pPyCAG-AGP14 transgene
GSM1045434 Serum without LIF (day2) ESC-like cells Prdm14 Knockout
GSM1045434 Serum without LIF (day2) ESC-like cells Prdm14 Knockout
GSM1045436 Serum without LIF (day2) ESCs No genetic modification
GSM1045436 Serum without LIF (day2) ESCs No genetic modification
GSM1045438 Serum (day2) ESC-like cells Prdm14 Knockout, pPyCAG-AGP14 transgene
GSM1045438 Serum (day2) ESC-like cells Prdm14 Knockout, pPyCAG-AGP14 transgene
GSM1045440 Serum (day2) ESC-like cells Prdm14 Knockout
GSM1045440 Serum (day2) ESC-like cells Prdm14 Knockout
GSM1045442 Serum (day2) ESCs No genetic modification
GSM1045442 Serum (day2) ESCs No genetic modification
GSM1045444 Serum+MEK inhibitor (day2) ESC-like cells Prdm14 Knockout
GSM1045444 Serum+MEK inhibitor (day2) ESC-like cells Prdm14 Knockout
GSM1045446 Serum+MEK inhibitor (day2) ESCs No genetic modification
GSM1045446 Serum+MEK inhibitor (day2) ESCs No genetic modification

Tags

  • cell
  • fibroblast
  • glycogen
  • inner cell mass
  • protein
  • serum

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