<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM1036016"><item key="CELL TYPE">sorted  HSCs (lin-Mac-1 low  sca1+ckit+CD150+CD48-)</item><item key="VARIATION">not specified</item><item key="DEVELOPMENTAL STAGE">fetal</item></item></item><item><item key="GSM1036017"><item key="CELL TYPE">sorted  HSCs (lin-Mac-1 low sca1+ckit+CD150+CD48-)</item><item key="VARIATION">not specified</item><item key="DEVELOPMENTAL STAGE">fetal</item></item></item><item><item key="GSM1036017"><item key="CELL TYPE">sorted  HSCs (lin-Mac-1 low sca1+ckit+CD150+CD48-)</item><item key="VARIATION">not specified</item><item key="DEVELOPMENTAL STAGE">fetal</item></item></item><item><item key="GSM1036019"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">wild type</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036019"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">wild type</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036019"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">wild type</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036022"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">Pu.1 knock-in (PU.1ki/ki)</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036022"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">Pu.1 knock-in (PU.1ki/ki)</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036022"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">Pu.1 knock-in (PU.1ki/ki)</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036019"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">wild type</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036019"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">wild type</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036019"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">wild type</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036019"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">wild type</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036022"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">Pu.1 knock-in (PU.1ki/ki)</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036022"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">Pu.1 knock-in (PU.1ki/ki)</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036022"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">Pu.1 knock-in (PU.1ki/ki)</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item><item><item key="GSM1036022"><item key="CELL TYPE">sorted  HSCs (lin-sca1+ckit+CD150+CD48-)</item><item key="VARIATION">Pu.1 knock-in (PU.1ki/ki)</item><item key="DEVELOPMENTAL STAGE">adult</item></item></item></item><item key="id">7078</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">In blood, the transcription factor C/EBPa is essential for myeloid differentiation and has been implicated in regulating self-renewal of...</item><item key="geo_gse_id">E-GEOD-42234</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">3</item><item key="sample_count">17</item><item key="tags"><item>cell</item><item>liver</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">cebpa-controls-acquisition-and-maintenance-of-adul</item><item key="geo_id_plat">E-GEOD-42234_A-AFFY-45</item><item key="name">C/EBPa controls acquisition and maintenance of adult hematopoietic stem cell quiescence</item><item key="created">Nov.12, 2014</item><item key="summary">In blood, the transcription factor C/EBPa is essential for myeloid differentiation and has been implicated in regulating self-renewal of fetal liver hematopoietic stem cells (HSCs). However, its function in adult HSCs is unknown. Here, using an inducible knockout model, we found that C/EBPa deficient adult HSCs underwent a pronounced expansion with enhanced proliferation, characteristics resembling fetal liver HSCs. Consistently, transcription profiling of C/EBPa deficient HSCs revealed a gene expression program similar to fetal liver HSCs. Moreover we observed that age-specific C/EBPa expression correlated with its inhibitory effect on the HSC cell cycle. Mechanistically, we identified N-Myc as a C/EBPa downstream target. C/EBPa upregulation during HSC transition from an active fetal state to a quiescent adult state was accompanied by down-regulation of N-Myc, and loss of C/EBPa resulted in de-repression of NMyc. Our data establish that C/EBPa acts as a molecular switch between fetal and adult states of HSC in part via transcriptional repression of the proto-oncogene N-Myc. HSCs of Pu.1 knock-in (PU.1ki/ki) mice were used for RNA extraction and hybridization on Affymetrix microarrays. We compared these microarray samples with the corresponding wild type.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-42234</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-42234/samples/</item></data></biogps>
