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Home › Dataset Library › Expression data of PTK7+ and PTK7- cells from differentiated pluripotent stem cells (PSC), and expression data from undifferentiated PSC...

Dataset: Expression data of PTK7+ and PTK7- cells from differentiated pluripotent stem cells (PSC), and expression data from undifferentiated PSC and definitive endoderm

As PSCs differentiate, they display characteristics of EMT as well as PTK7 expression. We sought to discover novel markers and...

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As PSCs differentiate, they display characteristics of EMT as well as PTK7 expression. We sought to discover novel markers and regulators of this process by comparing purified PTK7+ and PTK7- populations We used microarrays to detail the global program of gene expression underlying this EMT process and identified distinct classes of up-regulated genes during this process. PTK7+ and PTK7- populations were purified by FACS and subjected to lysis and RNA extraction. Undifferentiated PSCs and definitive endoderm were washed with PBS, then subjected to lysis and RNA extraction

Species:
human

Samples:
6

Source:
E-GEOD-42073

Updated:
Dec.12, 2014

Registered:
Jul.12, 2014


Factors: (via ArrayExpress)
Sample DIFFERENTIATION FACS POPULATION CELL POPULATION LENGTH OF DIFFERENTIATION
GSM1032057 Induced by ActivinA not specified Definitive endoderm derived from HSF1 5 days
GSM1032056 None not specified Undifferentiated HSF1 0 days
GSM1032055 Spontaneous PTK7+ differentiated XFiPSC2 2 days
GSM1032054 Spontaneous PTK7- differentiated XFiPSC2 2 days
GSM1032053 Spontaneous PTK7+ differentiated H9 2 days
GSM1032052 Spontaneous PTK7- differentiated H9 2 days

Tags

  • definitive endoderm
  • endoderm

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