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skin</item><item key="TIME">Week1_etanercept</item></item></item><item><item key="GSM1021299"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week2_etanercept</item></item></item><item><item key="GSM1021300"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week4_etanercept</item></item></item><item><item key="GSM102133"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week12_etanercept</item></item></item><item><item key="GSM1021296"><item key="TISSUE TYPE">Non-lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021297"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021298"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week1_etanercept</item></item></item><item><item key="GSM1021299"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week2_etanercept</item></item></item><item><item key="GSM1021300"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week4_etanercept</item></item></item><item><item key="GSM102133"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week12_etanercept</item></item></item><item><item key="GSM1021296"><item key="TISSUE TYPE">Non-lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021297"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021298"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week1_etanercept</item></item></item><item><item key="GSM1021299"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week2_etanercept</item></item></item><item><item key="GSM1021300"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week4_etanercept</item></item></item><item><item key="GSM102133"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week12_etanercept</item></item></item><item><item key="GSM1021296"><item key="TISSUE TYPE">Non-lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021297"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021298"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week1_etanercept</item></item></item><item><item key="GSM1021299"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week2_etanercept</item></item></item><item><item key="GSM1021296"><item key="TISSUE TYPE">Non-lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021297"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021298"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week1_etanercept</item></item></item><item><item key="GSM1021299"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week2_etanercept</item></item></item><item><item key="GSM102133"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week12_etanercept</item></item></item><item><item key="GSM1021296"><item key="TISSUE TYPE">Non-lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021297"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021298"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week1_etanercept</item></item></item><item><item key="GSM1021299"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week2_etanercept</item></item></item><item><item key="GSM1021300"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week4_etanercept</item></item></item><item><item key="GSM102133"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week12_etanercept</item></item></item><item><item key="GSM1021296"><item key="TISSUE TYPE">Non-lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021297"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021298"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week1_etanercept</item></item></item><item><item key="GSM1021299"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week2_etanercept</item></item></item><item><item key="GSM1021300"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week4_etanercept</item></item></item><item><item key="GSM102133"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week12_etanercept</item></item></item><item><item key="GSM1021296"><item key="TISSUE TYPE">Non-lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021297"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Pre-dose</item></item></item><item><item key="GSM1021298"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week1_etanercept</item></item></item><item><item key="GSM1021299"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week2_etanercept</item></item></item><item><item key="GSM1021300"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week4_etanercept</item></item></item><item><item key="GSM102133"><item key="TISSUE TYPE">Lesional skin</item><item key="TIME">Week12_etanercept</item></item></item></item><item key="id">4598</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">cDNA and cRNA hybridization technologies have different, probe-specific sensitivities. We used samples from an etanercept trial...</item><item key="geo_gse_id">E-GEOD-41663</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">81</item><item key="tags"><item>line</item><item>skin</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">re-analysis-by-microarray-using-cdna-target-of-sam</item><item key="geo_id_plat">E-GEOD-41663_A-AFFY-44</item><item key="name">Re-analysis by microarray using cDNA target of samples from psoriasis patients enrolled in an etanercept trial</item><item key="created">Sep.19, 2014</item><item key="summary">cDNA and cRNA hybridization technologies have different, probe-specific sensitivities. We used samples from an etanercept trial (GSE11903) to explore in a real-life setting the uniqueness of each platform. We obtained total RNA for a subset of the samples in GSE11903 from Jim Krueger and generated expression profiles using labeled cDNA target. From 14 patients, available base-line lesional and non-lesional skin biopsy pairs as well as post-dose samples were analyzed. All the samples were run on Affymetrix HU133 Plus 2.0 microarrays.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41663</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41663/samples/</item></data></biogps>
