{"owner": "ArrayExpress Uploader", "pop_total": 0, "species": "human", "factors": [{"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM102133": {"TISSUE TYPE": "Lesional skin", "TIME": "Week12_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM102133": {"TISSUE TYPE": "Lesional skin", "TIME": "Week12_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM102133": {"TISSUE TYPE": "Lesional skin", "TIME": "Week12_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM102133": {"TISSUE TYPE": "Lesional skin", "TIME": "Week12_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM102133": {"TISSUE TYPE": "Lesional skin", "TIME": "Week12_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM102133": {"TISSUE TYPE": "Lesional skin", "TIME": "Week12_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM102133": {"TISSUE TYPE": "Lesional skin", "TIME": "Week12_etanercept"}}, {"GSM1021296": {"TISSUE TYPE": "Non-lesional skin", "TIME": "Pre-dose"}}, {"GSM1021297": {"TISSUE TYPE": "Lesional skin", "TIME": "Pre-dose"}}, {"GSM1021298": {"TISSUE TYPE": "Lesional skin", "TIME": "Week1_etanercept"}}, {"GSM1021299": {"TISSUE TYPE": "Lesional skin", "TIME": "Week2_etanercept"}}, {"GSM1021300": {"TISSUE TYPE": "Lesional skin", "TIME": "Week4_etanercept"}}, {"GSM102133": {"TISSUE TYPE": "Lesional skin", "TIME": "Week12_etanercept"}}], "id": 4598, "ownerprofile_id": "arrayexpress_sid", "platform": 4, "summary_wrapped": "cDNA and cRNA hybridization technologies have different, probe-specific sensitivities. We used samples from an etanercept trial...", "geo_gse_id": "E-GEOD-41663", "owner_profile": "/profile/8773/arrayexpressuploader", "factor_count": 2, "sample_count": 81, "tags": ["line", "skin"], "lastmodified": "Dec.12, 2014", "is_default": false, "geo_gds_id": "", "slug": "re-analysis-by-microarray-using-cdna-target-of-sam", "geo_id_plat": "E-GEOD-41663_A-AFFY-44", "name": "Re-analysis by microarray using cDNA target of samples from psoriasis patients enrolled in an etanercept trial", "created": "Sep.19, 2014", "summary": "cDNA and cRNA hybridization technologies have different, probe-specific sensitivities. We used samples from an etanercept trial (GSE11903) to explore in a real-life setting the uniqueness of each platform. We obtained total RNA for a subset of the samples in GSE11903 from Jim Krueger and generated expression profiles using labeled cDNA target. From 14 patients, available base-line lesional and non-lesional skin biopsy pairs as well as post-dose samples were analyzed. All the samples were run on Affymetrix HU133 Plus 2.0 microarrays.", "source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41663", "sample_source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41663/samples/"}