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Home › Dataset Library › Re-analysis by microarray using cDNA target of samples from psoriasis patients enrolled in an etanercept trial

Dataset: Re-analysis by microarray using cDNA target of samples from psoriasis patients enrolled in an etanercept trial

cDNA and cRNA hybridization technologies have different, probe-specific sensitivities. We used samples from an etanercept trial...

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cDNA and cRNA hybridization technologies have different, probe-specific sensitivities. We used samples from an etanercept trial (GSE11903) to explore in a real-life setting the uniqueness of each platform. We obtained total RNA for a subset of the samples in GSE11903 from Jim Krueger and generated expression profiles using labeled cDNA target. From 14 patients, available base-line lesional and non-lesional skin biopsy pairs as well as post-dose samples were analyzed. All the samples were run on Affymetrix HU133 Plus 2.0 microarrays.

Species:
human

Samples:
81

Source:
E-GEOD-41663

Updated:
Dec.12, 2014

Registered:
Sep.19, 2014


Factors: (via ArrayExpress)
Sample TISSUE TYPE TIME
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM102133 Lesional skin Week12_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM102133 Lesional skin Week12_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM102133 Lesional skin Week12_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM102133 Lesional skin Week12_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM102133 Lesional skin Week12_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM102133 Lesional skin Week12_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM102133 Lesional skin Week12_etanercept
GSM1021296 Non-lesional skin Pre-dose
GSM1021297 Lesional skin Pre-dose
GSM1021298 Lesional skin Week1_etanercept
GSM1021299 Lesional skin Week2_etanercept
GSM1021300 Lesional skin Week4_etanercept
GSM102133 Lesional skin Week12_etanercept

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  • skin

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