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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">human</item><item key="factors"><item><item key="GSM1015549"><item key="TREATMENT">10 &#206;&#188;M of 5-Aza</item></item></item><item><item key="GSM1015549"><item key="TREATMENT">10 &#206;&#188;M of 5-Aza</item></item></item><item><item key="GSM1015549"><item key="TREATMENT">10 &#206;&#188;M of 5-Aza</item></item></item><item><item key="GSM1015546"><item key="TREATMENT">5 &#206;&#188;M of 5-Aza</item></item></item><item><item key="GSM1015546"><item key="TREATMENT">5 &#206;&#188;M of 5-Aza</item></item></item><item><item key="GSM1015546"><item key="TREATMENT">5 &#206;&#188;M of 5-Aza</item></item></item><item><item key="GSM1015543"><item key="TREATMENT">0 &#206;&#188;M of 5-Aza</item></item></item><item><item key="GSM1015543"><item key="TREATMENT">0 &#206;&#188;M of 5-Aza</item></item></item><item><item key="GSM1015543"><item key="TREATMENT">0 &#206;&#188;M of 5-Aza</item></item></item></item><item key="id">2283</item><item key="pop_total">0</item><item key="platform">4</item><item key="summary_wrapped">The RNA samples from HT-29 (ATCC) colon cancer cell line were reverse transcribed into cDNAs and categorized in 3 groups with different...</item><item key="pubmed_id">23902433</item><item key="geo_gse_id">E-GEOD-41364</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">9</item><item key="tags"><item>cancer</item><item>cell</item><item>colon</item><item>colon cancer</item><item>line</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-data-for-ht29-cells-treated-with-5-aza</item><item key="geo_id_plat">E-GEOD-41364_A-AFFY-44</item><item key="name">Expression data for HT29 cells treated with 5-aza-deoxy-cytidine [Affymetrix]</item><item key="created">Jul.11, 2014</item><item key="summary">The RNA samples from HT-29 (ATCC) colon cancer cell line were reverse transcribed into cDNAs and categorized in 3 groups with different concentrations of 5-aza-deoxy-cytidine (5-Aza); in each group three replicative 150 mm cultures were treated with: 1) dimethyl sulfoxide (vehicle alone, 0 &#956;M 5-Aza); 2) 5&#956;M 5-Aza and 3) 10 &#956;M 5-Aza; for five days We then used Affymetrix microarray platform to profile the gene expression of the 3 HT29 cell groups (3 replicates in each group) in order to search for differentially expressed genes The transcriptional response of HT-29 (ATCC) colon cancer cell line under 3 concentrations of 5-aza-deoxy-cytidine was investigated based on their RNA expression profiles</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41364</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41364/samples/</item></data></biogps>
