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Home › Dataset Library › Microarray analysis of genes activated by mouse CAR and human CAR in vivo.

Dataset: Microarray analysis of genes activated by mouse CAR and human CAR in vivo.

This dataset is a four-ligand x three-genotype Affymetrix microarray analysis of the regulation of liver genes in the mouse by the...

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This dataset is a four-ligand x three-genotype Affymetrix microarray analysis of the regulation of liver genes in the mouse by the constitutive androstane receptor (CAR). 24 female mice of mixed background (C57BL/6x129Sv) were divided into three groups: wild-type (contains only mouse CAR; mCAR), CAR.KO = knockout mice (mice ablated for mCAR gene; mCAR -/-), and CAR.AH= contains human CAR transgene under the control of the mouse albumin promoter in the mCAR -/- background. Each of the three groups underwent four different treatment regimens: CO = corn oil vehicle control, PB = phenobarbitol (100 mg/kg/day), an anti-convulsant agent which can translocate both mCAR and hCAR into the nucleus to turn on target gene expression, TC = TCPOBOP, a potent non-metabolized ligand of mCAR (3 mg/kg), CITCO = a hCAR specific ligand (30 mg/kg/day). Two mice were used per treatment group and each mouse RNA was used for one chip.

Species:
mouse

Samples:
24

Source:
E-GEOD-40120

Updated:
Dec.12, 2014

Registered:
Nov.23, 2014


Factors: (via ArrayExpress)
Sample LIGAND GENOTYPE
GSM985983 phenobarbitol wild-type
GSM985983 phenobarbitol wild-type
GSM985985 phenobarbitol mCAR knockout
GSM985985 phenobarbitol mCAR knockout
GSM985987 phenobarbitol hCAR transgenic in mCAR knockout background
GSM985987 phenobarbitol hCAR transgenic in mCAR knockout background
GSM985989 CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime wild-type
GSM985989 CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime wild-type
GSM98599 CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime mCAR knockout
GSM98599 CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime mCAR knockout
GSM985993 CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime hCAR transgenic in mCAR knockout background
GSM985993 CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime hCAR transgenic in mCAR knockout background
GSM985995 corn oil wild-type
GSM985995 corn oil wild-type
GSM985997 corn oil mCAR knockout
GSM985997 corn oil mCAR knockout
GSM985999 corn oil hCAR transgenic in mCAR knockout background
GSM985999 corn oil hCAR transgenic in mCAR knockout background
GSM98600 TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene wild-type
GSM98600 TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene wild-type
GSM986003 TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene mCAR knockout
GSM986003 TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene mCAR knockout
GSM986005 TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene hCAR transgenic in mCAR knockout background
GSM986005 TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene hCAR transgenic in mCAR knockout background

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  • liver

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