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Home › Dataset Library › Microarray analysis of genes activated by mouse CAR and human CAR in vivo.

Dataset: Microarray analysis of genes activated by mouse CAR and human CAR in vivo.

This dataset is a four-ligand x three-genotype Affymetrix microarray analysis of the regulation of liver genes in the mouse by the...

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This dataset is a four-ligand x three-genotype Affymetrix microarray analysis of the regulation of liver genes in the mouse by the constitutive androstane receptor (CAR). 24 female mice of mixed background (C57BL/6x129Sv) were divided into three groups: wild-type (contains only mouse CAR; mCAR), CAR.KO = knockout mice (mice ablated for mCAR gene; mCAR -/-), and CAR.AH= contains human CAR transgene under the control of the mouse albumin promoter in the mCAR -/- background. Each of the three groups underwent four different treatment regimens: CO = corn oil vehicle control, PB = phenobarbitol (100 mg/kg/day), an anti-convulsant agent which can translocate both mCAR and hCAR into the nucleus to turn on target gene expression, TC = TCPOBOP, a potent non-metabolized ligand of mCAR (3 mg/kg), CITCO = a hCAR specific ligand (30 mg/kg/day). Two mice were used per treatment group and each mouse RNA was used for one chip.

Species:
mouse

Samples:
24

Source:
E-GEOD-40120

Updated:
Dec.12, 2014

Registered:
Nov.23, 2014


Factors: (via ArrayExpress)
Sample GENOTYPE LIGAND
GSM985983 wild-type phenobarbitol
GSM985983 wild-type phenobarbitol
GSM985985 mCAR knockout phenobarbitol
GSM985985 mCAR knockout phenobarbitol
GSM985987 hCAR transgenic in mCAR knockout background phenobarbitol
GSM985987 hCAR transgenic in mCAR knockout background phenobarbitol
GSM985989 wild-type CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime
GSM985989 wild-type CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime
GSM98599 mCAR knockout CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime
GSM98599 mCAR knockout CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime
GSM985993 hCAR transgenic in mCAR knockout background CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime
GSM985993 hCAR transgenic in mCAR knockout background CITCO; 6-(4-chlorophenyl)imidazo[2-1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime
GSM985995 wild-type corn oil
GSM985995 wild-type corn oil
GSM985997 mCAR knockout corn oil
GSM985997 mCAR knockout corn oil
GSM985999 hCAR transgenic in mCAR knockout background corn oil
GSM985999 hCAR transgenic in mCAR knockout background corn oil
GSM98600 wild-type TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene
GSM98600 wild-type TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene
GSM986003 mCAR knockout TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene
GSM986003 mCAR knockout TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene
GSM986005 hCAR transgenic in mCAR knockout background TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene
GSM986005 hCAR transgenic in mCAR knockout background TCPOBOP; 1,4-bis[2-(3, 5-dichloropyridyloxy)]benzene

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  • liver

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