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Home › Dataset Library › Genome-wide expression study of the responses of murine NK cells and dendritic cell subsets to MCMV infection

Dataset: Genome-wide expression study of the responses of murine NK cells and dendritic cell subsets to MCMV infection

Murine Cytomegalovirus (MCMV) infection leads to the activation of various immune cells, including dendritic cells (DCs) and Natural...

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Murine Cytomegalovirus (MCMV) infection leads to the activation of various immune cells, including dendritic cells (DCs) and Natural Killer (NK) cells. This activation is partly driven by innate cytokines including IFN-I, which are induced early after infection. The objective was to address the role of different innate cytokines in shaping DC subsets and NK cell responses, in particular the role of cell intrinsic responses to IFN-I. In order to decipher the specific impact of cell-intrinsic IFN-I on cell subsets, we performed a genome-wide expression analysis on CD45.1 WT and CD45.2 IFNAR-/- splenic conventional DC (cDC) subsets and NK cells isolated from C57BL/6 [CD45.1 WT / CD45.2 IFNAR-KO] mixed bone marow chimera mice. This study includes data from cDC subsets (CD8a and CD11b) and NK cells purified by flow cytometry sorting from the spleen of bone marrow chimera (BMC) mice, under steady-state or MCMV condition. Two independent replicates were made for each cell type, from two independent pools of spleens from uninfected or d1.5 MCMV-infected BMC 5-8 mice, and were hybridized on 3 separate batches of gene chips.

Species:
mouse

Samples:
24

Source:
E-GEOD-39555

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample INFECTION VARIATION CELL TYPE
GSM971629 none WT natural killer (NK) cells
GSM971630 none IFNAR-KO natural killer (NK) cells
GSM97163 murine cytomegalovirus WT natural killer (NK) cells
GSM971632 murine cytomegalovirus IFNAR-KO natural killer (NK) cells
GSM971633 none WT CD8a+ dendritic cells (DC)
GSM971634 none IFNAR-KO CD8a+ dendritic cells (DC)
GSM971635 murine cytomegalovirus WT CD8a+ dendritic cells (DC)
GSM971636 murine cytomegalovirus IFNAR-KO CD8a+ dendritic cells (DC)
GSM971637 none WT CD11b+ dendritic cells (DC)
GSM971638 none IFNAR-KO CD11b+ dendritic cells (DC)
GSM971639 murine cytomegalovirus WT CD11b+ dendritic cells (DC)
GSM971640 murine cytomegalovirus IFNAR-KO CD11b+ dendritic cells (DC)
GSM971629 none WT natural killer (NK) cells
GSM971630 none IFNAR-KO natural killer (NK) cells
GSM97163 murine cytomegalovirus WT natural killer (NK) cells
GSM971632 murine cytomegalovirus IFNAR-KO natural killer (NK) cells
GSM971633 none WT CD8a+ dendritic cells (DC)
GSM971634 none IFNAR-KO CD8a+ dendritic cells (DC)
GSM971635 murine cytomegalovirus WT CD8a+ dendritic cells (DC)
GSM971636 murine cytomegalovirus IFNAR-KO CD8a+ dendritic cells (DC)
GSM971637 none WT CD11b+ dendritic cells (DC)
GSM971638 none IFNAR-KO CD11b+ dendritic cells (DC)
GSM971639 murine cytomegalovirus WT CD11b+ dendritic cells (DC)
GSM971640 murine cytomegalovirus IFNAR-KO CD11b+ dendritic cells (DC)

Tags

  • bone
  • bone marrow
  • cell
  • dendritic
  • genome
  • spleen

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